FC868814

Overview
NameFC868814
Unique NameFC868814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7605 contig Ccv1_Contig7605:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL---PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKN-NKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            + +  LITG + G+G ++ +   K G  V       D    +   L    + +   F++ D+R    +       V+  G  DI++NNAG        I + S  EF+   D NVKG    ++H   +MIP K+G IV++ S  G  G      Y  SK AV GL+RSVA E+
Sbjct:   19 LGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAEL 191          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: YXNA_BACSU (Uncharacterized oxidoreductase yxnA OS=Bacillus subtilis GN=yxnA PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTN----VKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            K   + ++ITG S G+G   A+  A++G  V+  +R ++ L  L  EL    H  +++  D+     V  +A   +   G  D  VNNA  ++      DV+ E+   + DTN    V G    ++H+    +P   G ++N+ S +G  G  + + Y ++K+A+ G + S+  E+
Sbjct:   28 KLKDQVIVITGASSGIGLVTARMAAEKGAKVVAAARNEEALKELTDELKEKGHDAIWVKADVGKEEDVNRIAETAISTFGRFDTWVNNA-AVSTFGHAMDVTVEDMKRMFDTNFWGPVYGTRAAVKHYTGRGVP---GALINVGSLFGDRGTVIQSTYASAKFALHGWTESIRMEL 199          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 48/169 (28.40%), Postives = 85/169 (50.30%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  ++TG S G+G ++A+ LA +G  V+   R + +L  +   + +    +     VD+     V EL     EK G  DI+VN+AG +  ++ I +   E ++ +ID N+KG    +   +P M+    G I+N++S  G         Y ASK AV  +++ + KE+
Sbjct:    7 KVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETSIVDVTHKEEVTELVEKTKEKFGQIDILVNSAGLM-LSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKEL 174          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 58/167 (34.73%), Postives = 93/167 (55.69%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +T LITG S G+G A+A+ L K G  VI     + KL  L + L   D+++   +++ + ++ EE   L+ +   + DI+V NAG I  +     +  ++FD VID N+K    + R  I  MI  + G I+N+SS  G +G    A YCASK  + G+++S++ EV
Sbjct:    7 KTSLITGASGGIGSAIARLLHKLGSKVIISGSNEKKLKLLGNTLK--DNYI---IEVCNLANKEECNNLISKISNL-DILVCNAG-ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 52/169 (30.77%), Postives = 89/169 (52.66%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            VSR+VL+TG +RG+G A+A+ LA  GH V    R              PD    +  D+  +++V+   + V E +G  +++V NAG I+K+  +  ++ E F+ VI+TN+ G     +     M   + G I+ + S  G  G    A Y A+K  + G++RS+++E+
Sbjct:   22 VSRSVLVTGGNRGIGLAIARRLAADGHKVAVTHRGSGA----------PDDLFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAG-ISKDAFLMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISREL 179          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y2146_BRAJA (Probable short-chain type dehydrogenase/reductase blr2146 OS=Bradyrhizobium japonicum GN=blr2146 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 52/176 (29.55%), Postives = 84/176 (47.73%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP-NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTIN---KNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            +G+   +  ++TG   G+G+A A  +A+ G  V+          +  +++     H L L +DI    +V  L        G  D++VNNA  ++   ++  I ++    +D  + TN++G     R  IP MI    G IVNMSS  G SG   +  Y ASK A+  LS S+A +
Sbjct:    1 MGRFEGKVAVVTGAGAGIGKACALAIAREGGRVVVADIDGSAAIACTAQIAAEAGHALALAIDIADAQAVAALFETAERHFGGVDLLVNNASAMHLTPRDRAILELELAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTALTSYAASKAAMNMLSSSLATQ 176          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 47/172 (27.33%), Postives = 86/172 (50.00%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVA-KEVPDGM 590
            + V++TG  RG+G  + +     G  V+ C + +    +L+ ELP     +F+  D+     V+ L    + + G  D +VNNAG      +  + S + F  +++ N+ G   + +  +P +    QG ++N+SS  G  G A   PY A+K AV  +++++A  E P G+
Sbjct:   10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA---VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 177          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 51/169 (30.18%), Postives = 89/169 (52.66%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            + +   + G SRG+GRA+A+ +A+RG+ +   +R  +   +   +L     HL L+ D+     V+     + +  G  + +VN AG IN++N +   + E+  + + TN+ G     R  +  MI  ++G IVN+ S  G  G +  + Y ASK  + G SR++AKEV
Sbjct:    1 MDKVCAVFGGSRGIGRAVARLMAQRGYRLAIVARNLEGARAAAGDLGGD--HLALSCDVAKEHDVQNTFEEIEKNLGRVNFLVNAAG-INRDNLLVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEV 166          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN---PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            +  +ITG +RG+G A A+   + G  V     TQ+++ +  ++L      +  L    D+ S  +V      V +K G  D+++NNAG I  N+    VS E+F  ++D NV G+ N        M   KQG+I+N +S  G  G+     Y  SK  V GL+  + +E+
Sbjct:    7 KITIITGGTRGIGFAAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGTVAQKYGRLDVMINNAG-ITMNSVFSRVSEEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREI 175          
BLAST of FC868814 vs. ExPASy Swiss-Prot
Match: Y5909_MYXXD (Uncharacterized oxidoreductase MXAN_5909 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_5909 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 57/157 (36.31%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNA---GTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASK 536
            RT L+TG S GLGR LA  LA+RG  V    R   +L +L+ E       +  + +D+    +  E  R +  + G  D++V NA   GT N     W    E    +IDTNV G A  L   +P M+  K+G +V +SS  G  G A  A Y ASK
Sbjct:    7 RTALVTGASSGLGRGLALWLARRGVRVFAAGRRLPQLQALRDEAQAAGVTVEPVELDVTKADATLERIRALDAEAGGLDLVVANAGVGGTTNAKRLPW----ERVRGIIDTNVTGAAATLSAVLPQMVERKRGHLVGVSSLAGFRGLAGHAAYSASK 159          
The following BLAST results are available for this feature:
BLAST of FC868814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
ABA2_ARATH6.622e-1331.21Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
YXNA_BACSU8.648e-1326.70Uncharacterized oxidoreductase yxnA OS=Bacillus su... [more]
Y0419_STAS18.648e-1328.40Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
FABG_RICTY8.648e-1334.733-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_MYCS28.648e-1330.773-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
Y2146_BRAJA1.129e-1229.55Probable short-chain type dehydrogenase/reductase ... [more]
DHB14_HUMAN1.129e-1227.3317-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
CBR4_BOVIN1.129e-1230.18Carbonyl reductase family member 4 OS=Bos taurus G... [more]
BAIA1_EUBSP1.129e-1230.59Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
Y5909_MYXXD1.475e-1236.31Uncharacterized oxidoreductase MXAN_5909 OS=Myxoco... [more]

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Properties
Property NameValue
Genbank descriptionC31005B02EF AbioticL1 Citrus clementina cDNA clone C31005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868814 ID=FC868814; Name=FC868814; organism=Citrus clementina; type=EST; length=687bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAATCCTGGTGTTATTACACTGACATGCTTACGTCCTGCTTTGGCAC
TTCTGCTGCATCATACCAGCACCTGATGCATGGGCTT
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