FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH26_ARATH (DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana GN=RH26 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31 Identity = 77/200 (38.50%), Postives = 124/200 (62.00%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-ILRRASSARKPHQ--IMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFR--NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L++TRF LS L+A+ +AGFE T VQ AT+P++ KDV A TG+GKT+AF++P +E +++ ++R Q I+ +++ PTREL+SQ A + P + +++GG ++ + ++++ +L+ TPGRL D +E R +++LVLDEAD LLDMGF++ I II+ +PK R+T LFS+ Sbjct: 379 LSKTRFDQFP--LSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSA 576
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX18_DICDI (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum GN=ddx18 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31 Identity = 79/194 (40.72%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 FS+L + E +++ E GF+ TP+QA +I L KD+ A TGSGKTLAF++P +E+L +++ KP G+II SPTREL+ QIY VA+ + ++ +GG K + +++E+ G NLL+ TPGRL D ++ +NL+ L++DEADR+L++GF++++ II ++PK R+T LFS+ T Sbjct: 121 FSNLP--IEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNF--KPRNGTGVIIISPTRELALQIYGVARELMKYHTQTHGIV-IGGASKKPEEERLEK-GVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTRQTMLFSATQT 308
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_GIBZE (ATP-dependent RNA helicase DBP4 OS=Gibberella zeae GN=DBP4 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.191e-30 Identity = 81/204 (39.71%), Postives = 123/204 (60.29%), Query Frame = 3 Query: 63 RMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 R++ K+ +FS+L LS P E L A F+ T VQA +PL KD+ A TGSGKTLAF++P++E L RA + +IISPTREL++QI+ V + + T + L++GG +K + ++++ N+L+ TPGR+ ++ D NL+ILVLDEADR++DMGFQ + +I LP+ R+T +FS+ Sbjct: 39 RVDELDLKSDATKKFSELP--LSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKLYRAQWTEFDG-LGALIISPTRELAAQIFEVLRK-VGTKHSFSAGLVIGGKSLKEEAERLDR--MNILVCTPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRERQTLMFSA 236
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH25_ARATH (DEAD-box ATP-dependent RNA helicase 25 OS=Arabidopsis thaliana GN=RH25 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30 Identity = 75/218 (34.40%), Postives = 129/218 (59.17%), Query Frame = 3 Query: 36 PNPRLP*TVRMESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQ---IMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFR--NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 P P ++ + L++TRF LS L+ + +AGF+ T VQ AT+PL+ KD+ A TG+GKT+AF++P +E + +A A + ++ I+ +++ PTREL+ Q A + P + +++GG ++ + +++++ +L+ TPGRL D ++ R +++LVLDEAD LLDMGF+++I II+ +PK R+T LFS+ Sbjct: 59 PASTTPLVTQIAKTSDSYLSKTRFDQFP--LSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSA 274
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_GIBZE (ATP-dependent RNA helicase DRS1 OS=Gibberella zeae GN=DRS1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30 Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 E+NP+K T + F + +LS P++ LA GF TP+QA +IP+ KDV A TGSGKT AF++P++E R +K +++ PTREL+ Q + VA ++ D+K L VGG+ +KA +++ +++I TPGR D M +EILVLDEADR+L+ GF +++ I++ LPK R+T LFS+ T Sbjct: 246 ENNPDKKATASSFQTM--SLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILE--RLLYRPKKIPTTRVVVLLPTRELAIQCHAVATK-LAAFTDIKFTLAVGGLSLKAQELELKLR-PDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMT 444
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_CRYNE (ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans GN=HAS1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 91/207 (43.96%), Postives = 125/207 (60.39%), Query Frame = 3 Query: 72 SNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 S P FS L LS P A+ GFE T VQA TIP L + KDV A TGSGKT+AF++P VE+L S+ R KP G+II SPTREL+ QI+ VA+ + VL+ GG KA+ K+ + G NL++ TPGRL D ++ F+NL+ LV+DEADR+L++GF++++ II LP + R++ LFS+ T Sbjct: 120 SAPGTDYERVPFSTLN--LSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELL---STLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVLM-GGANRKAEADKLVK-GVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSENRQSMLFSATQT 319
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH31_ORYSJ (DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa subsp. japonica GN=Os06g0526600 PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 76/200 (38.00%), Postives = 118/200 (59.00%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRR---ASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFR--NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L++TRF + +LS L+ + AG+E T VQ AT+P++ KDV A TG+GKT+AF++P +E++ + +K I +++ PTREL+ Q A + P + L++GG + + K++ +L+ TPGRL D ME R +++L+LDEADRLLDMGF+ I I++ LPK R+T LFS+ Sbjct: 76 LSQTRFDEC--SLSPLTLKGVKAAGYERMTAVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFATRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSA 273
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_PICGU (ATP-dependent RNA helicase HAS1 OS=Pichia guilliermondii GN=HAS1 PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSSYST 683 +F DL LSEP + A+ + GFE T VQ TIP L + +DV A TGSGKTLAF++P +E+L S KP G+I+ SPTREL+ QI+ VA+ ++ ++ +GG + + K+ + G NLLI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ II LP R++ LFS+ T Sbjct: 106 KFEDL--GLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLY--SLKFKPRNGTGVIVVSPTRELALQIFGVARDLMAHHSQTLGIV-IGGANRRQEADKLMK-GVNLLIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSDERQSMLFSATQT 295
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_NEUCR (ATP-dependent RNA helicase has-1 OS=Neurospora crassa GN=has-1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 85/204 (41.67%), Postives = 128/204 (62.75%), Query Frame = 3 Query: 78 PNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSSYST 683 P+ A T FS+L LS+ ++A+AE GF T +Q IP L + KDV A TGSGKTLAF++P +E+L +S KP G ++++PTREL+ QI+ VA+ + V ++GG +A+ +K+ +G NLLI TPGRL D ++ + F+N+ L++DEADR+L++GF+ ++ II LPK R+T LFS+ T Sbjct: 100 PSIATNATDFSELN--LSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEML--SSLRFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTYGV-VIGGANRRAEAEKL-GKGVNLLIATPGRLLDHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDRQTMLFSATQT 296
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_DEBHA (ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii GN=HAS1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 ESN + +T+ F + LSEP L+A+ + GF T VQA TIP L + +DV A TGSGKTLAF++P +E+L S KP G+++ SPTREL+ QI+ VA+ ++ ++ +GG + + +K+ + G NLLI TPGRL D ++ F+N++ LV+DEADR+L++GF++++ II LP + R++ LFS+ T Sbjct: 95 ESNHDDIVTDN-FEEA--GLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLY--SLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQTFGIV-IGGANRRQEAEKLMK-GVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNEDRQSMLFSATQT 294 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |