FC868819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.246e-29 Identity = 82/205 (40.00%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 E+ P K + F ++ +LS P+L L GF TP+QA TIP+ KDV A TGSGKT AFVVP++E R +K +I++PTREL+ Q + VA +++ D+K L VGG+ +K ++ +++I TPGR D M +EILVLDEADR+L+ GF +++ I++ LPK R+T LFS+ T Sbjct: 283 ENQPKKKGEMSSFQEM--SLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE--RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVK-LASHTDIKFCLAVGGLSLKVQEAELRLR-PDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMT 481
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_MAGGR (ATP-dependent RNA helicase DBP4 OS=Magnaporthe grisea GN=DBP4 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.246e-29 Identity = 75/194 (38.66%), Postives = 119/194 (61.34%), Query Frame = 3 Query: 93 TETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 T F++L LSEP + + ++ FE T +QA IPL +D+ A TGSGKTLAF+VPL+E L R ++ ++ +++SPTREL+ Q + V + I + L++GG V+ + + + N+LIGTPGR+ +++ D NL++LVLDEADR++D+GFQ+ + ++ LP R+T LFS+ Sbjct: 47 TPKAFAELP--LSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKLYREQWTQEA-KLGALVLSPTRELAVQTFQVLRK-IGRHHLFSAGLVIGGKSVREEAEALSR--MNILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTRQTLLFSA 234
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RHLB_SHEPW (ATP-dependent RNA helicase rhlB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rhlB PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 82/202 (40.59%), Postives = 125/202 (61.88%), Query Frame = 3 Query: 90 LTETRFSDLKPA---LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP--KLRRTGLFSS 674 ++ET S K A L + V +AL E GFEFCTP+QA ++P+L + KD+A A TG+GKTLAF+V + A + RK +Q +I++PTREL+ QI A ++ +K ++ GG +A +K+ ++G ++LIGT GR+ D + R V+D ++ +VLDEADR+ D+GF K I ++ R+P K R LFS+ Sbjct: 1 MSETHLSTKKFADFPLHKEVQQALNEVGFEFCTPIQALSLPILLAKKDIAGQAQTGTGKTLAFLVATFNHLLTEAAPTERKINQPRAIIMAPTRELAIQIAKDAN-LLAKHTGLKVGIVYGGEGYEAQ-RKVLDKGIDILIGTTGRIIDYV-RQGVIDVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSA 199
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: RH26_ORYSJ (DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp. japonica GN=Os01g0618500 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 74/197 (37.56%), Postives = 122/197 (61.93%), Query Frame = 3 Query: 90 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLD--FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 L+ETRF +S L+A+ +AG+E T VQ AT+P++ +DV A TG+GKT+AF++P +E+L S+ + I ++I PTREL++Q+ A+ + + +++GG ++ + + ++ +L+ TPGRL D +E + +++LVLDEADRLLDMGF++ I II+ +PK R+T LFS+ Sbjct: 71 LSETRFDQCP--VSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELL---STLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSA 262
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_NEOFI (ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 82/197 (41.62%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 102 RFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSAR-KPHQIMGMII-SPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 +F++L L+E L+A+ + GF+ T +Q TIP L + +DV A TGSGKTL+F++P VE+L S+ R KP G+I+ SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFS+ T Sbjct: 141 KFTEL--GLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEML---SALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQT 330
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: HAS1_KLULA (ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis GN=HAS1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 84/198 (42.42%), Postives = 123/198 (62.12%), Query Frame = 3 Query: 96 ETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMI-ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSSYST 683 E FSDLK LS+ ++A+ + GF T VQ TIP L + KDV A TGSGKTLAF++P +E+L S KP G+I I+PTREL+ QI+ VA+ + ++ +GG + + K+ + G N+LI TPGRL D ++ F+NL+ LV+DEADR+L++GF+ ++ II LP + R++ LFS+ T Sbjct: 33 EGSFSDLK--LSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLH--SLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIV-IGGANRRQEADKLMK-GVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQT 224
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DRS1_SCHPO (ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe GN=drs1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 78/206 (37.86%), Postives = 118/206 (57.28%), Query Frame = 3 Query: 69 ESNPNKALTETRFSDLKPA-LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 E + K++ T S + LS P+L+ L+ GFE T +Q TIPL KD+ A TGSGKT AF+VP++E R +K +I+ PTREL+ Q + VA I++ D+ L +GG+ +K +++ + +++I TPGR D M N+EI+V+DEADR+L+ GF +++ II PK R+T LFS+ T Sbjct: 246 EGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE--RLLYRPKKVPTTRVLILCPTRELAMQCHSVATK-IASFTDIMVCLCIGGLSLKLQEQELRKR-PDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMT 447
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DDX18_MOUSE (ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 76/200 (38.00%), Postives = 122/200 (61.00%), Query Frame = 3 Query: 87 ALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 A +T F+ L ++E L+A+ E GF+ T +Q +I L +D+ A TGSGKTLAF++P++E++ + P G +I+SPTREL+ Q + V + ++ L++GG A+V+K+ G N+++ TPGRL D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFS+ T Sbjct: 163 AFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFM--PRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEVQKLLN-GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQT 358
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_USTMA (ATP-dependent RNA helicase DBP4 OS=Ustilago maydis GN=DBP4 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 78/187 (41.71%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 126 LSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMG-MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSSYST 683 LS+ L AG+ T +QA ++ L KDV A TGSGKTLAF++P++EIL R P +G ++ISPTREL+ QI+ V + I + + L++GG +VK + ++ N+LI TPGRL M++ D N+++LVLDEADR+LDMGF + ++ I+ LP+ R+T LFS+ T Sbjct: 65 LSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEILYRRKWG--PSDGLGALVISPTRELAIQIFEVLRK-IGSYHTFSAGLVIGGKDVKQEKDRLSR--INILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQTMLFSATQT 246
BLAST of FC868819 vs. ExPASy Swiss-Prot
Match: DBP4_VANPO (ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP4 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.830e-29 Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 105 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSS 674 F DL +S L+ L ++ F T +Q +IP+ D+ A TGSGKTLAF++P++E L R + +IISPTREL+ QIY V I T + L++GG +VK ++++I + N+LIGTPGR+ M++ L+ NL++LVLDEADR LDMGF+K + I+S LP R+T LFS+ Sbjct: 43 FKDLP--ISNSTLKGLNDSAFLKLTDIQRDSIPMSLKGYDILGAAKTGSGKTLAFLIPVLEKLYRERWTEFDG-LGALIISPTRELAMQIYEVLLK-IGTSTSFSAGLVIGGKDVKFEMERISK--INILIGTPGRILQHMDQAIGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPPTRQTLLFSA 226 The following BLAST results are available for this feature:
BLAST of FC868819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868819 ID=FC868819; Name=FC868819; organism=Citrus clementina; type=EST; length=685bpback to top |