FC868824
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868824 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.673e-13 Identity = 38/87 (43.68%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 295 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 555 PDR ++ P S P +L G +PGD+G+DP GL+ P+ Q EL+H RWAMLGAAG IPE K G P W+ G Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAG 142
BLAST of FC868824 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 555 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ G Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WYDAG 131
BLAST of FC868824 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 555 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG 130
BLAST of FC868824 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 34/96 (35.42%), Postives = 47/96 (48.96%), Query Frame = 1 Query: 346 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIA 633 P YL G PGD+G+D GL + P + +Y+ ELIH RWAML G I+PEA N W + G Y G+ +P + ++A Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGL--GNWVKAQEW-----AAIPGGQATYLGQPVPWGTLPTILA 144 The following BLAST results are available for this feature:
BLAST of FC868824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868824 ID=FC868824; Name=FC868824; organism=Citrus clementina; type=EST; length=646bpback to top |