FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 6.452e-60
Identity = 116/148 (78.38%), Postives = 127/148 (85.81%), Query Frame = 1
Query:    4 FVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSS-TAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 444
            FV EF + NKKDI     ALRRLRTACERAKRTLSS TAQTTIEIDSLYEG+DFY+TITRARFEELNMDLF+KCM+PVEKCLRD+K+DK+ VH+VVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNE+
Sbjct:  245 FVTEFLTNNKKDIRWECEALRRLRTACERAKRTLSSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFKKCMDPVEKCLRDSKIDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER 392          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 3.540e-58
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFVQEFK K KKD++ N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFY++ITRARFEELN DLFR  MEPVEK LRDAKMDKS +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL K+INPDE           IL G+ +E+VQDL
Sbjct:  240 HFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.345e-57
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 2.295e-57
Identity = 109/152 (71.71%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAKMDK+ +HD+VLVGGSTRIPK+Q+LLQD+FNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_DAUCA6.452e-6078.38Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP7D_MANSE3.540e-5874.34Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP7C_SAGOE1.345e-5772.37Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.345e-5772.37Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.345e-5772.37Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE1.345e-5772.37Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN1.345e-5772.37Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.345e-5772.37Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_BOVIN1.345e-5772.37Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP7C_DANRE2.295e-5771.71Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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