FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 2.295e-57
Identity = 111/152 (73.03%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAKMDK+ VHD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.914e-57
Identity = 109/152 (71.71%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFE+LN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEKLNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 5.112e-57
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK  +KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFY++ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRNDKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 5.112e-57
Identity = 111/152 (73.03%), Postives = 128/152 (84.21%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFY++ITRARFEE+  DLFR  +EPVEK LRDAKMDK+ +HDVVLVGGSTRIPKVQ+LLQDFFNG+EL K+INPDE           ILSG+ +E VQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDL 393          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 8.720e-57
Identity = 106/152 (69.74%), Postives = 130/152 (85.53%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+QEFK KNKKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFY++ITRARFEEL  DLFRK MEPVE+ LRD+K+DK++V+++VLVGGSTRIP+VQ+L+ DFFNGKE CK+INPDE           +L+G+ +EK QDL
Sbjct:  238 HFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDL 389          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.139e-56
Identity = 108/152 (71.05%), Postives = 127/152 (83.55%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF QEFK KNKKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSLYEGIDFY++ITRARFEEL  DLFR  MEPVEK LRD+K+DKS+V+++VLVGGSTRIP++Q+L+ DFFNGKE CK+INPDE           IL G+ +EK QDL
Sbjct:  238 HFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDL 389          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.487e-56
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K KKDIS N RA+RRLR+ACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  ++PVEK LRDAKMDK  +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  240 HFIAEFKRKYKKDISDNKRAVRRLRSACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKGQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 1.487e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV EFK K+KKDI GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFY++ITRARFEEL  DLFR C++PVEK L+D+K+DK ++H++VLVGGSTRIPKVQQLLQ+FFNGKEL K+INPDE           ILS EG  KV DL
Sbjct:  238 HFVDEFKRKHKKDIMGNQRAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVEKVLKDSKLDKKSIHEIVLVGGSTRIPKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADL 389          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 1.943e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFVQEFK K+KKD++ N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG DFY++ITRARFEELN DLFR  M+PVEK LRDAK+DKS +HD+VLVGGSTRIPKVQ+LLQD FNGKEL K+INPDE           IL G+ +++VQDL
Sbjct:  240 HFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF++EF+ K+ KD+SGN RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFY++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HDVVLVGGSTRIPKVQ+LLQDFFNGKEL K+INPDE           +L G+  EKVQDL
Sbjct:  242 HFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDL 393          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_ONCMY2.295e-5773.03Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP7C_CHICK3.914e-5771.71Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_CRIGR5.112e-5771.71Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP70_ONCTS5.112e-5773.03Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP72_SCHPO8.720e-5769.74Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_SCHPO1.139e-5671.05Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP7C_ORYLA1.487e-5671.05Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HS7C1_DICDI1.487e-5671.05Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7D_DROME1.943e-5671.05Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP76_HUMAN4.328e-5670.39Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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