FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 110/152 (72.37%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFVQEFK KNKKD++ N RALRRLRTACERAKRTLSS AQTTIEIDSL+EGIDFY++ITRARFEEL  DLF   +EPVEK LRD+K+DK +VH++VLVGGSTRIPKVQ+LL DFFNG+EL K+INPDE           ILSG+ +EK QDL
Sbjct:  238 HFVQEFKRKNKKDLTTNARALRRLRTACERAKRTLSSAAQTTIEIDSLFEGIDFYTSITRARFEELCGDLFSHTIEPVEKVLRDSKIDKGSVHEIVLVGGSTRIPKVQKLLTDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSEKTQDL 389
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFY+++TRARFEEL  DLFR  +EPVEK LRDAKMDK  +HDVVLVGGSTRIPK+Q+LLQDFFNG+EL K+INPDE           ILSG+ +  VQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSVTRARFEELCSDLFRGTLEPVEKALRDAKMDKGQIHDVVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSGNVQDL 393
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 109/152 (71.71%), Postives = 125/152 (82.24%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV EFK  +KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFY+ ITRARFEEL  DLFR  M+PVEK LRDAKMDK+ VHD+VLVGGSTRIPKVQ+LL DFF+GKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  239 HFVAEFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDL 390
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.328e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 5.652e-56
Identity = 108/152 (71.05%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFVQEF+ K+KKD+  N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EG+DFY+++TRARFEELN DLFR  MEPV K LRDAKMDK  +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  240 HFVQEFQRKHKKDLGQNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNGDLFRGTMEPVAKALRDAKMDKGQIHDIVLVGGSTRIPKVQRLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEAVQDL 391
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 5.652e-56
Identity = 106/152 (69.74%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFVQEFK K+KKD+S NPRALRRLRTACERAKRTLSS AQTTIEIDSL+EG+DFY+++TRARFEEL  DLFR  +EPVEK LRDAK+DK+ VH++VLVGGSTRIP++ +L+ DFFNGKE  K+INPDE           IL+G+ +EK QDL
Sbjct:  238 HFVQEFKRKHKKDLSSNPRALRRLRTACERAKRTLSSAAQTTIEIDSLFEGVDFYTSLTRARFEELCQDLFRSTLEPVEKVLRDAKIDKAAVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSEKTQDL 389
[Close]
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 5.652e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1 
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_USTMA4.328e-5672.37Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP71_ORYLA4.328e-5671.71Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_BRUMA4.328e-5671.71Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HS71L_PIG4.328e-5671.05Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MACFA4.328e-5671.05Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN4.328e-5671.05Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71L_BOVIN4.328e-5671.05Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP7A_DROME5.652e-5671.05Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP71_PUCGR5.652e-5669.74Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HS71L_RAT5.652e-5671.05Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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