FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 216.083 bits (549), Expect = 5.652e-56
Identity = 108/152 (71.05%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q  +EIDSLYEGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQD+FNG++L K+INPDE           IL G+ +EKVQDL
Sbjct:  242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDL 393          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.259e-55
Identity = 109/152 (71.71%), Postives = 124/152 (81.58%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF  EFK K+KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFY+ ITRARFEEL  DLFR  M+PVEK LRDAKMDKS VHD+VLVGGSTRIPKVQ+LL D F+GKEL K+INPDE           ILSG+ +E VQDL
Sbjct:  241 HFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDL 392          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.645e-55
Identity = 110/152 (72.37%), Postives = 122/152 (80.26%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EF+ K  KDI  N RALRRLRTACERAKRTLSS+AQT +EIDSL +G DFY+ ITRARFEELN DLFR  ++PVEK LRDAKMDKS +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL K+INPDE           ILSGE  E VQDL
Sbjct:  238 HFVKEFQKKYNKDIRSNKRALRRLRTACERAKRTLSSSAQTNLEIDSLCDGTDFYTVITRARFEELNADLFRGTLDPVEKALRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGEKCEAVQDL 389          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.805e-55
Identity = 106/152 (69.74%), Postives = 124/152 (81.58%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV EFK K+KKD+  N RALRRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFY++ITRARFEEL  DLFR C++PV+K L+D+K+DK T+H++VLVGGSTRIPKVQQLLQD FNGKEL K+INPDE           ILS EG  KV D+
Sbjct:  239 HFVDEFKRKHKKDLMTNQRALRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVDKVLKDSKLDKKTIHEIVLVGGSTRIPKVQQLLQDHFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADI 390          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 2.805e-55
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE           IL G+ +E VQDL
Sbjct:  240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 2.805e-55
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE           IL G+ +E VQDL
Sbjct:  240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.664e-55
Identity = 105/152 (69.08%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EF+ K++KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFY++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HDVVLVGGSTRIP+VQ+LLQDFFNGKEL K+INPDE           +L G+  EKV+DL
Sbjct:  242 HFVEEFRRKHRKDLSWNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDL 393          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.664e-55
Identity = 106/152 (69.74%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE           IL G+ +E VQDL
Sbjct:  240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 213.386 bits (542), Expect = 3.664e-55
Identity = 106/152 (69.74%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE           IL G+ +E VQDL
Sbjct:  240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.664e-55
Identity = 106/152 (69.74%), Postives = 126/152 (82.89%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HFV+EFK K+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LLQDFFNG++L K+INPDE           IL G+ +E VQDL
Sbjct:  238 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDL 389          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71L_MOUSE5.652e-5671.05Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP7A_CAEEL1.259e-5571.71Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_SCHMA1.645e-5572.37Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HS7C2_DICDI2.805e-5569.74Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HS71B_MOUSE2.805e-5570.39Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE2.805e-5570.39Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP76_SAGOE3.664e-5569.08Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_PONAB3.664e-5569.74Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN3.664e-5569.74Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP71_CERAE3.664e-5569.74Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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