FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY------EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKV 447
            +EFK ++  D+  + +AL+RL  A E+AK  LSST +TTI +  +         +     +TRA+FEEL   L ++   PVE+ L+DA +  + + +V+LVGG+TR+P VQQ++++   GKE  +++NPDE           +L GE  + V
Sbjct:  234 EEFKKEHGVDLKADRQALQRLIEAAEKAKIELSSTLETTISLPFIALDPASKTPLHLEKKLTRAKFEELIQPLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELL-GKEPNRSVNPDEVVAMGAAIQAGVLMGEVRDVV 384          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THESQ (Chaperone protein dnaK OS=Thermotoga sp. (strain RQ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY-----EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            +EFK ++  D+  + +AL+RLR A E+AK  LS+  +T + +  +      + +     ITR+ FE L  DL      P+E+ L DAK+    + +++LVGG TR+P VQ+ +++FF GKE  K++NPDE           IL+G    K +D+
Sbjct:  219 EEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFF-GKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDI 371          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THEP1 (Chaperone protein dnaK OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY-----EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            +EFK ++  D+  + +AL+RLR A E+AK  LS+  +T + +  +      + +     ITR+ FE L  DL      P+E+ L DAK+    + +++LVGG TR+P VQ+ +++FF GKE  K++NPDE           IL+G    K +D+
Sbjct:  219 EEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFF-GKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDI 371          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THENN (Chaperone protein dnaK OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY-----EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            +EFK ++  D+  + +AL+RLR A E+AK  LS+  +T + +  +      + +     ITR+ FE L  DL      P+E+ L DAK+    + +++LVGG TR+P VQ+ +++FF GKE  K++NPDE           IL+G    K +D+
Sbjct:  219 EEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFF-GKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDI 371          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_THEMA (Chaperone protein dnaK OS=Thermotoga maritima GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   10 QEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLY-----EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            +EFK ++  D+  + +AL+RLR A E+AK  LS+  +T + +  +      + +     ITR+ FE L  DL      P+E+ L DAK+    + +++LVGG TR+P VQ+ +++FF GKE  K++NPDE           IL+G    K +D+
Sbjct:  219 EEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFF-GKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDI 371          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_STRMK (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + V+EF      D+  +P AL+RL+ A ERAK  LSS  QT + +  +             +TRA+ E L  DL +K +EP    L DA +  S + +V+LVGG TR+PKVQQ + +FF GKE  K++NPDE           +L G+
Sbjct:  241 YLVEEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSAQQTEVNLPYVTADASGPKHLNIKLTRAKLEALVDDLIKKSIEPCRVALNDAGLRSSDISEVILVGGQTRMPKVQQAVTEFF-GKEPRKDVNPDEAVALGAAIQGGVLGGD 387          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL--------YEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDE 384
            H ++ FK ++  D+S +P AL+RL+ A E+AK+ LSST+ T I +  +        +  I F    TRA  E+L  DL  K +EP  + L+DA    + + +VVLVGG TR+PKVQ+ ++ FF G+E  K +NPDE
Sbjct:  233 HLIEVFKKESGIDLSKDPLALQRLKEAAEKAKKELSSTSTTDINLPYITADSTGPKHLNIKF----TRAELEKLVDDLIEKTIEPCRQALKDAGFKPNDIQEVVLVGGMTRMPKVQEAVKKFF-GREPHKGVNPDE 363          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL--------YEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDE 384
            H +  FK ++  D+  +P AL+RL+ A E+AK+ LSS   T I +  +        +  I F    TRA  E+L  DL  K +EP  K L+DA +  S + +VVLVGG TR+PKVQ+ ++ FF G+ L K +NPDE
Sbjct:  233 HLINTFKKESGIDLRNDPLALQRLKEAAEKAKKELSSALTTDINLPYITADNSGPKHLNIKF----TRAELEKLVDDLIEKTIEPCRKALKDAGLKASDIQEVVLVGGMTRMPKVQEAVEKFF-GRALHKGVNPDE 363          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_RALEJ (Chaperone protein dnaK OS=Ralstonia eutropha (strain JMP134) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            + + EFK     D+S +  AL+RL+ A E+AK  LSS+ QT I +  +             ITRA+ E L  DL  + +EP    ++DA +  S + DV+LVGG TR+PKVQ+ +++FF GKE  K++NPDE           +LSG+
Sbjct:  240 YIIGEFKKDQGVDLSKDVLALQRLKEAAEKAKIELSSSQQTEINLPYITADASGPKHLNLKITRAKLEALVEDLITRTIEPCRTAIKDAGVKVSEIDDVILVGGMTRMPKVQEQVKEFF-GKEARKDVNPDEAVAVGAAIQGSVLSGD 386          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: DNAK_ODOSI (Chaperone protein dnaK OS=Odontella sinensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.525e-20
Identity = 56/146 (38.36%), Postives = 86/146 (58.90%), Query Frame = 1
Query:    7 VQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGE 432
            V+EF+ +   D++ + +AL+RL  A E+AK  LS+  +TTI +  +             +TR  FE L  +L  +C  PVEK L DA+++KS +++VVLVGGSTRIP +Q L++   N K+  +++NPDE           IL+GE
Sbjct:  236 VKEFEDQEGIDLTQDIQALQRLTEAAEKAKMELSTVEKTTIHLPFITADKTGPKHIEKELTRKTFETLCQELIERCQIPVEKALTDARLEKSDINEVVLVGGSTRIPAIQNLVESLTN-KKPNQSVNPDEVVAIGAAIQAGILAGE 380          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_THET28.525e-2036.18Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_THESQ8.525e-2035.06Chaperone protein dnaK OS=Thermotoga sp. (strain R... [more]
DNAK_THEP18.525e-2035.06Chaperone protein dnaK OS=Thermotoga petrophila (s... [more]
DNAK_THENN8.525e-2035.06Chaperone protein dnaK OS=Thermotoga neapolitana (... [more]
DNAK_THEMA8.525e-2035.06Chaperone protein dnaK OS=Thermotoga maritima GN=d... [more]
DNAK_STRMK8.525e-2038.51Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_RICPR8.525e-2041.18Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_RICBR8.525e-2041.18Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]
DNAK_RALEJ8.525e-2038.51Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_ODOSI8.525e-2038.36Chaperone protein dnaK OS=Odontella sinensis GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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