FC868994

Overview
NameFC868994
Unique NameFC868994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length456
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:38..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.375e-54
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK K+KKDIS N RA+RRL TACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  ++PVEK LRDAKMDK+ VHD+VLVGGSTRIPK+++LLQDFFNGKEL K+INPDE              G+ +E VQDL
Sbjct:  240 HFIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELNKSINPDEAVAYGAAVQAESSLGDKSENVQDL 391          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 2.375e-54
Identity = 105/152 (69.08%), Postives = 124/152 (81.58%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+ EFK KNKKDI GN RALRRLRTACERAK TLSS+AQT++EIDSLYEGIDFY++ITRARFEEL  DLFR  ++PVEK L+DAK+DKS V+++VLVGGSTRIPKVQ+L+ DFFNGKE  K+INPDE           IL+G+ + K QDL
Sbjct:  238 HFINEFKRKNKKDICGNQRALRRLRTACERAKTTLSSSAQTSLEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVLKDAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDL 389          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.101e-54
Identity = 104/152 (68.42%), Postives = 123/152 (80.92%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            H  +EFK K+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  243 HLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 3.101e-54
Identity = 104/152 (68.42%), Postives = 123/152 (80.92%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            H  +EFK K+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  243 HLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 4.051e-54
Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            H  +EFK K+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.051e-54
Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            H  +EFK K+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.051e-54
Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            H  +EFK K+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFY++ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL K+INPDE           IL G+ +E VQDL
Sbjct:  243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 6.909e-54
Identity = 104/152 (68.42%), Postives = 125/152 (82.24%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+QEFK KNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFY++ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  ++INPDE           IL+G+ + K QDL
Sbjct:  237 HFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDL 388          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 209.149 bits (531), Expect = 6.909e-54
Identity = 104/152 (68.42%), Postives = 125/152 (82.24%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 456
            HF+QEFK KNKKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFY++ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  ++INPDE           IL+G+ + K QDL
Sbjct:  237 HFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDL 388          
BLAST of FC868994 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 6.909e-54
Identity = 104/148 (70.27%), Postives = 121/148 (81.76%), Query Frame = 1
Query:    1 HFVQEFKSKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 444
            HFV EFK K+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFY++ITRARFEEL  DLFR  M+PVE+ LRDAK+DKS+VH++VLVGGSTRIP++Q+L+ DFFNGKE  K+INPDE           ILSG+   K
Sbjct:  237 HFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSK 384          
The following BLAST results are available for this feature:
BLAST of FC868994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_ICTPU2.375e-5469.08Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP72_PICAN2.375e-5469.08Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP72_CAPHI3.101e-5468.42Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN3.101e-5468.42Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP72_RAT4.051e-5468.42Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE4.051e-5468.42Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN4.051e-5468.42Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_YEAST6.909e-5468.42Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST6.909e-5468.42Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP71_PARBA6.909e-5470.27Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionC31007D05EF AbioticL1 Citrus clementina cDNA clone C31007D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868994 ID=FC868994; Name=FC868994; organism=Citrus clementina; type=EST; length=456bp
CATTTTGTTCAGGAGTTTAAGTCGAAGAACAAGAAGGATATTAGTGGCAA
CCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGA
CTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAG
GGTATTGACTTCTACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAA
CATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGG
ATGCTAAGATGGACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGT
TCCACTAGGATTCCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGG
CAAGGAGCTCTGCAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTG
CTGCTGTTCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAG
GATCTG
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