FC868999

Overview
NameFC868999
Unique NameFC868999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9440 contig Ccv1_Contig9440:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL24_ARATH (Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGLU24 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 3
Query:  240 TRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +R  FP  FLFGTA++AYQ EGA +   R PSVWD +    PEK  +  NG  A +F++RYKEDI L+K +  DS R SISW+RI PHG    GV++ GV FY++LI+EL   G+ PFVT+FHWDTPQ LE+EYGGFLS  IVKDF +YA+  F
Sbjct:   40 SRAHFPKGFLFGTATAAYQVEGAVNETCRGPSVWDIYCKKYPEKC-NGDNGTQAVDFFYRYKEDIQLMKNLNTDSFRLSISWTRIFPHGREENGVSKSGVQFYHDLIDELKRNGIIPFVTVFHWDTPQTLENEYGGFLSAHIVKDFREYAEFVF 192          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.795e-44
Identity = 82/161 (50.93%), Postives = 114/161 (70.81%), Query Frame = 3
Query:  219 CLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            C   +   R+ FP  F FG A+SAYQ EGAAH   R  + WD F    PEK+ D S+ D+A + Y  YK+D+ L+K++   + R SI+WSR+LP G ++GGV++ G+ +YNNLINEL + G++P+VT+FHWD PQ LEDEYGGFLS +IV+D+ +YA+L F
Sbjct:   39 CDNTHAFNRSGFPKNFTFGAATSAYQIEGAAH---RALNGWDYFTHRYPEKVPDRSSADLACDSYDLYKDDVKLLKRMNVQAYRLSIAWSRVLPKGRLTGGVDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLEDEYGGFLSTRIVEDYTNYAELLF 196          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.569e-44
Identity = 83/156 (53.21%), Postives = 115/156 (73.72%), Query Frame = 3
Query:  234 GSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            G +R +FP  F+FGTA+SAYQ EG A  GGR PS+WD F +++P  I +++  DV  + Y RYKED+ ++K +GFD+ RFSISWSRI P+G  +G VNQ+GVD+YN LI+ ++  G+KP+  L+H+D P AL ++Y G+LSP IV+ F DYAD CF
Sbjct:   39 GLSRRAFPEGFVFGTAASAYQVEGMAKQGGRGPSIWDAF-IEKPGTIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRFSISWSRIFPNG--TGMVNQEGVDYYNRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCF 191          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 83/154 (53.90%), Postives = 113/154 (73.38%), Query Frame = 3
Query:  240 TRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +R +FP  F++GTA++A+Q EGA + G R PS+WDTF    P +  +H N DVA +FY RYKEDI L+K +  D+ R SI+W RI PHG +S G+++ GV FY++LI+EL+   + P VT+FHWDTPQ LEDEYGGFLS +IV+DF +YA+  F
Sbjct:   40 SRLNFPEGFIWGTATAAFQVEGAVNEGCRGPSMWDTFTKKFPHRCENH-NADVAVDFYHRYKEDIQLMKDLNTDAFRLSIAWPRIFPHGRMSKGISKVGVQFYHDLIDELLKNNIIPLVTVFHWDTPQDLEDEYGGFLSGRIVQDFTEYANFTF 192          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL08_ARATH (Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 83/154 (53.90%), Postives = 116/154 (75.32%), Query Frame = 3
Query:  240 TRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            TRN FP +FLFG  +SAYQ+EGAA+  GR PSVWDT +        + SNGD+A + Y +YKED+ L+ ++G +S RFSISWSR++P+G   G +N +G+ FY NLI EL S+G++P VTL+H+D PQ+LEDEYGG+++ KI++DF  +AD+CF
Sbjct:   24 TRNDFPEDFLFGAGTSAYQWEGAANEDGRTPSVWDTTS-----HCYNGSNGDIACDGYHKYKEDVKLMAEMGLESFRFSISWSRLIPNGR--GRINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDEYGGWINHKIIEDFTAFADVCF 170          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.885e-44
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 3
Query:  234 GSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            G TR SFP  F+FGTAS+AYQYEGA    GR  ++WDTFA     KI D SN DVA + Y R++EDI L+  +G D+ RFSI+WSRI P+G   G VNQ G+D YN LI+ L++ G++P+VTL+HWD PQALED+Y G+L  +IV DF  YA+ CF
Sbjct:   44 GLTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFG-KITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNG--VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCF 196          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43
Identity = 86/156 (55.13%), Postives = 110/156 (70.51%), Query Frame = 3
Query:  234 GSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            G +R +FP  F+FGTA+SAYQ EG A  GGR PS+WD FA   P  +  + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G   G VNQ+GV +YNNLIN L+  G+ P+V L+H+D P ALE +YGG+L+ K+   F +YAD CF
Sbjct:   37 GLSRAAFPKRFVFGTATSAYQVEGMAASGGRGPSIWDAFA-HTPGNVAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCF 189          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL04_ARATH (Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU4 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43
Identity = 83/179 (46.37%), Postives = 121/179 (67.60%), Query Frame = 3
Query:  165 QNLFVCYLITSSICLSSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            + +   + I  +   S  C   +  +R+ +P  F+FG  +SAYQ+EGAA   GRKPS+WDT    +     D  NGD+A + Y +YK+D+ L+     D+ RFSISWSR++P+G   G VNQ+G+ FY NLI EL+S+G++P VTL+H+D PQ+LEDEYGG+L+ +++KDF  YAD+CF
Sbjct:    2 EQILALFAIFLAFAFSGKCSDVF--SRSDYPEGFVFGAGTSAYQWEGAAAEDGRKPSLWDTLCHSR-----DQGNGDIACDGYHKYKDDVKLMVDTNLDAFRFSISWSRLIPNGR--GPVNQKGLQFYKNLIQELVSHGIEPHVTLYHYDHPQSLEDEYGGWLNHRMIKDFTTYADVCF 171          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL41_ARATH (Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 84/154 (54.55%), Postives = 110/154 (71.43%), Query Frame = 3
Query:  240 TRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +R +FP  F+FGTASSAYQ+EGA   G +  S+WDTF  ++P KILD SN D   + Y R+  DI L+K +  D+ RFSISWSRI P+G  +G VN  GV +YN+LI+ L++ G+KP+VTL+HWD PQALED Y G+LS ++V DF  YA  CF
Sbjct:   31 SRANFPDGFVFGTASSAYQFEGAVKEGNKGESIWDTFTKEKPGKILDFSNADTTVDQYHRFHNDIDLMKDLRMDAYRFSISWSRIFPNG--TGEVNPDGVKYYNSLIDALLAKGIKPYVTLYHWDLPQALEDRYEGWLSREVVDDFEHYAFTCF 182          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 82/155 (52.90%), Postives = 114/155 (73.55%), Query Frame = 3
Query:  237 STRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            S +N FP  F+FG+A+SAYQ+EGA    GRKPSVWDTF   +     + SNGD+  + Y +YKED+ L+ + G D+ RFSISWSR++P+G   G VN +G+ FY N I EL+S+G++P VTLFH+D PQ LEDEYGG+++ +I++DF  YA++CF
Sbjct:   22 SDKNDFPEGFIFGSATSAYQWEGAFDEDGRKPSVWDTFLHTR-----NLSNGDITSDGYHKYKEDVKLMVETGLDAFRFSISWSRLIPNGR--GPVNPKGLQFYKNFIQELVSHGIEPHVTLFHYDHPQYLEDEYGGWINRRIIQDFTAYANVCF 169          
The following BLAST results are available for this feature:
BLAST of FC868999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL24_ARATH4.437e-4456.49Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGL... [more]
BGL35_ARATH5.795e-4450.93Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
BGL26_ORYSJ7.569e-4453.21Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL18_ARATH9.885e-4453.90Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]
BGL08_ARATH9.885e-4453.90Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL06_ORYSJ9.885e-4456.41Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL07_ORYSJ1.291e-4355.13Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL04_ARATH1.291e-4346.37Beta-glucosidase 4 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL41_ARATH1.686e-4354.55Putative beta-glucosidase 41 OS=Arabidopsis thalia... [more]
BGL03_ARATH1.686e-4352.90Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]

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Properties
Property NameValue
Genbank descriptionC31007D10EF AbioticL1 Citrus clementina cDNA clone C31007D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868999 ID=FC868999; Name=FC868999; organism=Citrus clementina; type=EST; length=701bp
GGAAATTGAATAAAATAATAGCTCACTGTACGTACTGCTTAATTAATATA
TGTATTTGGGGGCGGGTTAGGTTATGCATCATATACTACTATTAGTTCAT
AATGATGAAGCTTCCATATATAATTCATCGGAAGGGAGAGGTAGGGAGAG
TGGAAGTTAAATTTCAGAATCTTTTTGTCTGTTATCTGATCACATCTTCG
ATTTGCTTATCATCTGTATGCCTCCCCTGCTACGGCTCCACTCGGAATAG
CTTTCCGCCTGAGTTTTTATTTGGAACAGCATCAAGTGCTTACCAGTATG
AAGGAGCAGCTCACGTTGGAGGGAGGAAACCAAGCGTATGGGATACCTTC
GCCATGGATCAACCAGAGAAAATTTTGGACCACAGTAATGGGGATGTAGC
TGACAACTTTTACTTTCGTTACAAGGAGGACATTGCTTTGGTGAAGCAAG
TTGGTTTCGACTCCCTAAGATTCTCAATATCATGGTCCAGAATTTTACCT
CATGGAAATATTAGTGGGGGAGTGAACCAACAAGGTGTCGATTTCTACAA
TAATCTCATCAACGAGCTCATTTCATACGGCTTAAAGCCCTTTGTGACTT
TATTCCACTGGGACACTCCACAAGCTCTAGAAGATGAATATGGTGGATTC
TTAAGTCCTAAAATTGTAAAAGATTTTGGTGACTATGCGGACTTGTGCTT
C
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