FC868999

Overview
NameFC868999
Unique NameFC868999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9440 contig Ccv1_Contig9440:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL17_ORYSJ (Putative beta-glucosidase 17 OS=Oryza sativa subsp. japonica GN=BGLU17 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 78/160 (48.75%), Postives = 102/160 (63.75%), Query Frame = 3
Query:  234 GSTRNSFPPEFLFGTASSAYQYE----GAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            G  R+ FP  FLFG A+SAYQ      G +H G     VW    +  P +I D  NGDVAD+ Y RY ED+ ++  +G +S RFSISW+RILP  +  GGVN  G+ FYN LI+ L+  G++PFVTL H+D PQ LE  YGG+L   I ++FG Y+D+CF
Sbjct:   27 GLRRDDFPVGFLFGAATSAYQVGWSIMGCSHGGW----VWSLPFLVDPGRISDRRNGDVADDHYHRYTEDVEILHNLGVNSYRFSISWARILP--SRFGGVNSAGIAFYNRLIDALLQKGIQPFVTLNHFDIPQELEIRYGGWLGAGIREEFGYYSDVCF 180          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGLA_BACCI (Beta-glucosidase OS=Bacillus circulans GN=bglA PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 72/150 (48.00%), Postives = 105/150 (70.00%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            FP +F +G A++AYQ EGA +  GR  S+WDTFA   P K+ +  NG+VA + Y R +ED+ L+K +G    RFSISW R+LP G  +G VN+ G+D+Y+ L++EL++ G++PF TL+HWD PQAL+D+ GG+ S   +  F +YA+L F
Sbjct:    6 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFA-HTPGKVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQG--TGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMF 151          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: GBA3_HUMAN (Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 68/151 (45.03%), Postives = 99/151 (65.56%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +FP  F +  A++AYQ EG     G+ P VWDTF     E++  +  GDVA   Y  ++ED+  +KQ+G    RFS+SWSR+LP G  +G +NQ+G+D+YN +I++L+  G+ P VTL+H+D PQ LED+ GG+LS  I++ F  YA  CF
Sbjct:    2 AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGT-TGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCF 150          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LCTL_MOUSE (Lactase-like protein OS=Mus musculus GN=Lctl PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 67/151 (44.37%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +FPP F +G  SSAYQ EGA    G+ PS+WD F   + E++L     D A + Y++ +EDIAL+K++     RFS+SW R+LP G  +  VN++G+ FY++ I+ L+   + P VTL HWD PQ L+  YGG+ +  + + F DYADLCF
Sbjct:   35 TFPPGFSWGVGSSAYQTEGAWDEDGKGPSIWDAFTHGRKEQVLGGDTADTACDSYYKVQEDIALLKELQVSHYRFSLSWPRLLPTGVRAEQVNKRGIKFYSDFIDALLKSNITPVVTLHHWDLPQMLQVAYGGWQNVSMTRYFSDYADLCF 185          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 70/150 (46.67%), Postives = 106/150 (70.67%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            FP +F++GTA++AYQ EGA    GR  S+WDTFA   P K+ +  NG+VA + Y RY+EDI L+K++G  + RFS+SW RI P+G+  G VNQ+G+D+Y+ +++ L   G++PF TL+HWD PQAL+D  GG+ + + ++ F  +A+  F
Sbjct:    6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFA-HTPGKVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMF 151          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 73/148 (49.32%), Postives = 96/148 (64.86%), Query Frame = 3
Query:  213 SVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLS 656
            +V L   G  R SFP  FLFGTA+SAYQ EG  H  GR PS+WD F +  P KI +++  ++  + Y RYKED+ L++ +  D+ RFSISWSRI P G  SG +N  GV +YN LI+ LI  G+ P+  L+H+D P ALE +Y G LS
Sbjct:   22 AVPLATGGLNRKSFPEGFLFGTATSAYQVEGETHQDGRGPSIWDAF-VKIPGKIANNATAEITVDQYHRYKEDVDLMQNLNIDAYRFSISWSRIFPEG--SGKINSNGVAYYNRLIDYLIEKGITPYANLYHYDLPLALEQKYQGLLS 166          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LPH_HUMAN (Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 7.851e-33
Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +F  +FL+G +SSAYQ EGA    G+ PS+WD F       + D++ GD+A + Y +   D+ +++ +   + RFSISWSRI P G  +  +N  GVD+YN LIN L++  + P VTLFHWD PQAL+D  GG+ +P ++  F  YAD CF
Sbjct:  902 TFRDDFLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKDNATGDIACDSYHQLDADLNMLRALKVKAYRFSISWSRIFPTGR-NSSINSHGVDYYNRLINGLVASNIFPMVTLFHWDLPQALQD-IGGWENPALIDLFDSYADFCF 1050          

HSP 2 Score: 123.635 bits (309), Expect = 9.931e-28
Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            FP  F++  AS+AYQ EGA    G+  S+WDTF+   P ++ + + GDVA + Y +  ED+  ++ +G    RFSISWSRILP G  +  +N+ G+++Y  LI+ L++  ++P VT++HWD PQ L+D  GG+ +  IV+ F +YAD+ F
Sbjct: 1377 FPEGFIWSAASAAYQIEGAWRADGKGLSIWDTFS-HTPLRVENDAIGDVACDSYHKIAEDLVTLQNLGVSHYRFSISWSRILPDGT-TRYINEAGLNYYVRLIDTLLAASIQPQVTIYHWDLPQTLQD-VGGWENETIVQRFKEYADVLF 1523          

HSP 3 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 3
Query:  243 RNSFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNG----DVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +++FP  FL+G ++ A+  EG    GGR  S+WD      P + L+ + G    +VA + Y +   D+AL+  +     +FSISWSRI P G+ S   +  GV +YN LI+ L   G++P  TLFHWD PQAL+D +GG+ +  +V  F DYA  CF
Sbjct:  379 QDTFPEGFLWGASTGAFNVEGGWAEGGRGVSIWD------PRRPLNTTEGQATLEVASDSYHKVASDVALLCGLRAQVYKFSISWSRIFPMGHGSSP-SLPGVAYYNKLIDRLQDAGIEPMATLFHWDLPQALQD-HGGWQNESVVDAFLDYAAFCF 527          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LCTL_HUMAN (Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.025e-32
Identity = 66/151 (43.71%), Postives = 99/151 (65.56%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +FP  F +G  SSAYQ EGA    G+ PS+WD F      K+L +   DVA + Y++ +EDI L++++  +  RFS+SW R+LP G  +  VN++G++FY++LI+ L+S  + P VTL HWD PQ L+ +YGG+ +  +   F DYA+LCF
Sbjct:   36 TFPLGFSWGVGSSAYQTEGAWDQDGKGPSIWDVFTHSGKGKVLGNETADVACDGYYKVQEDIILLRELHVNHYRFSLSWPRLLPTGIRAEQVNKKGIEFYSDLIDALLSSNITPIVTLHHWDLPQLLQVKYGGWQNVSMANYFRDYANLCF 186          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32
Identity = 68/151 (45.03%), Postives = 101/151 (66.89%), Query Frame = 3
Query:  249 SFPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            +FP +F++G+A++AYQ EGA +  G+  S+WD F+   P  I D   GDVA + Y RY+EDI ++K++G  S RFSISW RI P G  +G +NQ+G+DFY  L N L+  G+ P +TL+HWD PQ L+D+ GG+ +      F +Y+++ F
Sbjct:    5 TFPKDFIWGSATAAYQIEGAYNEDGKGESIWDRFS-HTPGNIADGHTGDVACDHYHRYEEDIKIMKEIGIKSYRFSISWPRIFPEG--TGKLNQKGLDFYKRLTNLLLENGIMPAITLYHWDLPQKLQDK-GGWKNRDTTDYFTEYSEVIF 151          
BLAST of FC868999 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32
Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            F  +FL+G +SS YQ EG  +  G+ PS+WD F       + D++ GDVA + Y +   D+ +++ +   S RFSISWSRI P G  +  +N+QGVD+YN LI+ L+   + P VTLFHWD PQAL+D  GG+ +P +++ F  YAD CF
Sbjct:  905 FRDDFLWGVSSSPYQIEGGWNADGKGPSIWDNFTHTPGNGVKDNATGDVACDSYHQLDADLNILRTLKVKSYRFSISWSRIFPTGR-NSTINKQGVDYYNRLIDSLVDNNIFPMVTLFHWDLPQALQD-IGGWENPSLIELFDSYADYCF 1052          

HSP 2 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 64/150 (42.67%), Postives = 97/150 (64.67%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            FP  F++  AS++YQ EGA    G+  S+WDTF+   P +I +  NGDVA + Y +  ED+  ++ +G    RFSI+WSRILP G  +  +N+ G+ +Y   I+ L++ G+ P VT++HWD PQAL+D  GG+ +  IV+ F +YAD+ F
Sbjct: 1378 FPKGFIWSAASASYQVEGAWRADGKGLSIWDTFS-HTPLRIGNDDNGDVACDSYHKIAEDVVALQNLGVSHYRFSIAWSRILPDGT-TKFINEAGLSYYVRFIDALLAAGITPQVTIYHWDLPQALQD-VGGWENETIVQRFKEYADVLF 1524          

HSP 3 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  252 FPPEFLFGTASSAYQYEGAAHVGGRKPSVWDTFAMDQPEKILDHSNGDVADNFYFRYKEDIALVKQVGFDSLRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISYGLKPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCF 701
            FP  FL+G ++ A+  EG    GGR PS+WD +      +    +   VA + Y +   D+AL++ +     +FSISWS + P G  S   N+QGV +YN LI+ L+   ++P  TLFHWD PQAL+ E GG+ +  +V+ F DYA  CF
Sbjct:  384 FPEGFLWGISTGAFNVEGGWAEGGRGPSIWDHYGNLNAAE--GQATAKVASDSYHKPASDVALLRGIRAQVYKFSISWSGLFPLGQKSTP-NRQGVAYYNKLIDRLLDSHIEPMATLFHWDLPQALQ-EQGGWQNESVVEAFLDYAAFCF 529          
The following BLAST results are available for this feature:
BLAST of FC868999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL17_ORYSJ1.869e-3448.75Putative beta-glucosidase 17 OS=Oryza sativa subsp... [more]
BGLA_BACCI2.440e-3448.00Beta-glucosidase OS=Bacillus circulans GN=bglA PE=... [more]
GBA3_HUMAN3.187e-3445.03Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3... [more]
LCTL_MOUSE5.437e-3444.37Lactase-like protein OS=Mus musculus GN=Lctl PE=2 ... [more]
BGLA_PAEPO5.437e-3446.67Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
BGL43_ARATH5.437e-3449.32Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
LPH_HUMAN7.851e-3344.37Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT... [more]
LCTL_HUMAN1.025e-3243.71Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 ... [more]
BGLA_CLOTH1.339e-3245.03Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
LPH_RAT2.284e-3244.67Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionC31007D10EF AbioticL1 Citrus clementina cDNA clone C31007D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868999 ID=FC868999; Name=FC868999; organism=Citrus clementina; type=EST; length=701bp
GGAAATTGAATAAAATAATAGCTCACTGTACGTACTGCTTAATTAATATA
TGTATTTGGGGGCGGGTTAGGTTATGCATCATATACTACTATTAGTTCAT
AATGATGAAGCTTCCATATATAATTCATCGGAAGGGAGAGGTAGGGAGAG
TGGAAGTTAAATTTCAGAATCTTTTTGTCTGTTATCTGATCACATCTTCG
ATTTGCTTATCATCTGTATGCCTCCCCTGCTACGGCTCCACTCGGAATAG
CTTTCCGCCTGAGTTTTTATTTGGAACAGCATCAAGTGCTTACCAGTATG
AAGGAGCAGCTCACGTTGGAGGGAGGAAACCAAGCGTATGGGATACCTTC
GCCATGGATCAACCAGAGAAAATTTTGGACCACAGTAATGGGGATGTAGC
TGACAACTTTTACTTTCGTTACAAGGAGGACATTGCTTTGGTGAAGCAAG
TTGGTTTCGACTCCCTAAGATTCTCAATATCATGGTCCAGAATTTTACCT
CATGGAAATATTAGTGGGGGAGTGAACCAACAAGGTGTCGATTTCTACAA
TAATCTCATCAACGAGCTCATTTCATACGGCTTAAAGCCCTTTGTGACTT
TATTCCACTGGGACACTCCACAAGCTCTAGAAGATGAATATGGTGGATTC
TTAAGTCCTAAAATTGTAAAAGATTTTGGTGACTATGCGGACTTGTGCTT
C
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