FC869039

Overview
NameFC869039
Unique NameFC869039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9450 contig Ccv1_Contig9450:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.144e-61
Identity = 112/148 (75.68%), Postives = 131/148 (88.51%), Query Frame = 1
Query:  274 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            IA+DVT+LIG TP+VYLN + +GCV  +AAKLE+MEPC SVKDRIGFSMI+DAE+KGLI PG+S+L+EPTSGNTG+GLAF AA+KGYKLI+TMPASMS ERR++L AFG ELVLTD  KGMKGA+ KAEEIL  TPN YMLQQF+NPA
Sbjct:    5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPA 152          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.575e-60
Identity = 111/151 (73.51%), Postives = 133/151 (88.08%), Query Frame = 1
Query:  265 GLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            G  IA+DVT+LIG TP+VYLN +  GCV  +AAKLE MEPC SVKDRIG+SMI DAE+KGLITPGKS+L+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTD   GMKGAVQKAEE+   T N+++LQQF+NPA
Sbjct:    2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPA 152          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.057e-60
Identity = 110/152 (72.37%), Postives = 134/152 (88.16%), Query Frame = 1
Query:  262 EGLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            E + IA+DVT+LIG TP+VYLN +V GCVA +AAKLE MEPC SVKDRIG+SMI DAE+KGLI PG+S+L+EPTSGNTG+GLAF+AA+KGYKLI+TMP+SMSLERR++L+ F +ELVLTD  KGMKGA+ KAEEI   TPN+Y+LQQF+NPA
Sbjct:    4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPA 155          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.021e-59
Identity = 109/148 (73.65%), Postives = 130/148 (87.84%), Query Frame = 1
Query:  274 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            IA+DVT+LIG TP+VYLN +  GCV  +AAKLE MEPC SVKDRIG+SMI DAE+KG I PGKS+L+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTD   GMKGAVQKAEE+   TPN+Y+LQQF+N A
Sbjct:    9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTPNSYILQQFENAA 156          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.741e-59
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 1
Query:  271 NIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +IA+DVT+LIG TP+VYLN +  GCV    AKLE MEPC SVKDRIG+SMI DAE+KGLITPG S+L+EPTSGNTGIGLAF+AA+KGYKL LTMPASMS+ERR++LKAFGAELVLTD   GMKGAV+KAEEI   TPN+Y+LQQF+NPA
Sbjct:    7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPA 155          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.073e-56
Identity = 107/152 (70.39%), Postives = 130/152 (85.53%), Query Frame = 1
Query:  262 EGLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            E +NIAEDVTQLIG TPMVYLN +  GC+A+IAAKLE MEPC SVKDRIG SMI +AE  G ITP K++LVEPT+GNTG+G+AF+AA+KGYKLI+TMPAS+++ERR+LL+A GAE+VLT+  KG+KGAV KA+EI+  T NAYM QQFDN A
Sbjct:   95 ETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTA 246          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.608e-47
Identity = 94/152 (61.84%), Postives = 120/152 (78.95%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTI--VKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            + IA ++T+LIG+TP+V LN I  ++GC A I  KLE M P  SVKDRIG +MI  AEQ+GLI PGK++L+EPTSGNTGI LA +AA+KGY+LILTMP +MS ERR +LKA+GA+L LT   +GM G +++A+E+  S PNAYMLQQFDNPA
Sbjct:    1 MKIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDNPA 152          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42
Identity = 85/150 (56.67%), Postives = 113/150 (75.33%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            ++IAED+TQLIG+TP+V L  +  G VA+I AKLE   P  SVKDRIG +M+  AEQ GLI P  +I++EPTSGNTGI LA + A++GY+ +LTMP +MSLERR+LL+A+GAEL+LT    GM GA+ KAEE+  +    ++ QQF+NPA
Sbjct:    1 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPA 149          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42
Identity = 85/150 (56.67%), Postives = 113/150 (75.33%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            ++IAED+TQLIG+TP+V L  +  G VA+I AKLE   P  SVKDRIG +M+  AEQ GLI P  +I++EPTSGNTGI LA + A++GY+ +LTMP +MSLERR+LL+A+GAEL+LT    GM GA+ KAEE+  +    ++ QQF+NPA
Sbjct:    1 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPA 149          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.221e-41
Identity = 82/150 (54.67%), Postives = 112/150 (74.67%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            ++IAEDVTQL+G TP+V L  + +G +A++ AKLE   P  SVKDRIG +MI  AE+ GLI P  ++++EPTSGNTGI LA + A++GY  +LTMP +MS+ERR+LL+A+GAEL+LT    GM GA+ KAEE+  S    ++ QQF+NPA
Sbjct:    1 MSIAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPD-TVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFENPA 149          
The following BLAST results are available for this feature:
BLAST of FC869039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK1_ARATH4.144e-6175.68Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK1_ORYSJ1.575e-6073.51Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK_SOLTU2.057e-6072.37Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK_WHEAT1.021e-5973.65Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK_MAIZE1.741e-5975.17Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK4_ARATH3.073e-5670.39Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY32.608e-4761.84Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU4.308e-4256.67Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO4.308e-4256.67Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE6.221e-4154.67Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionC31007H03EF AbioticL1 Citrus clementina cDNA clone C31007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869039 ID=FC869039; Name=FC869039; organism=Citrus clementina; type=EST; length=718bp
GGTAGCATCATCAGTTGGTCGTCAGACAGTTAGTCCCACAAAGTTCCAAA
AACAATGGCCACTTCGTCTTCTCTGGTGTGCAGTCCGTTGACTGCTCCTC
TCTGCATCTCCAAGAAATCATCATTGGCCACTCTGAAACTGGGCTACATT
AGCCCCATAACAGCAGCTCGAAGATTGAAGCAGAATTTGTACAAGGTCTC
TTACAAACCCTGCAACTCTGTTGTGTGCAAGGCTGTCTCTGTGAAGCCGC
AGACTGGGATTGAAGGTCTCAACATTGCTGAAGATGTCACTCAGCTTATT
GGGAAGACGCCAATGGTATACCTGAATACTATTGTCAAGGGGTGTGTTGC
AAACATTGCTGCCAAGCTTGAAATCATGGAACCATGTTGTAGTGTTAAGG
ACAGGATTGGTTTCAGTATGATAGCTGATGCCGAGCAAAAAGGACTAATA
ACGCCTGGAAAGAGTATTCTTGTAGAGCCCACTAGTGGAAACACTGGAAT
TGGCCTTGCTTTCATAGCTGCTTCGAAAGGATATAAGCTCATTTTGACTA
TGCCAGCCTCAATGAGCTTGGAAAGGAGAGTTCTTCTGAAAGCATTTGGA
GCTGAGCTTGTATTAACTGATTCAGNCAAAGGCATGAAGGGGGCTGTGCA
GAAAGCTGAAGAAATTTTGAATAGCACACCTAATGCATATATGCTTCAGC
AATTTGACAATCCTGCTA
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