FC869039

Overview
NameFC869039
Unique NameFC869039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9450 contig Ccv1_Contig9450:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35
Identity = 81/150 (54.00%), Postives = 108/150 (72.00%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            + +A  +T+LIG TP+V LN +     A++  KLE M P  SVKDRIG +MI  AE++G +  G +I +EPTSGNTGIGLA +AA+KG K IL MP +MS+ERR LL+A+GAELVLT   +GMKGA++KAEE L      ++ QQF+NP+
Sbjct:    2 VRVANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTI-IEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEE-LAEKHGYFVPQQFNNPS 149          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAS (Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAR (Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAN (Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAM (Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_STAAC (Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 81/146 (55.48%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  280 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT   + MKGA++KA+E L      +  QQF+NPA
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 1
Query:  268 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAYMLQQFDNPA 717
            L I  +   LIG TP+V LN +     A +  KLE   P  SVKDR  + MI +AEQ GL+ PG S+++EPTSGNTGIGLA  AA++GYK IL MP +M+ ER  LLKA+GAE+VLT   + M G+++KA+E+    PN+Y+  QFDN A
Sbjct:    2 LKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTA 150          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.279e-32
Identity = 79/149 (53.02%), Postives = 101/149 (67.79%), Query Frame = 1
Query:  274 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 717
            I  D +  IG TP+V L     G   N+  K+E   P  SVK RIG +M+  AE+ G +T GK I V+ TSGNTGI LA++AA++GYK+ LTMP +MSLER+ LL   G  LVLT+  KGMKGA+ KAEEI+ S P+ Y ML+QF+NPA
Sbjct:    3 IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPA 148          
BLAST of FC869039 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.536e-31
Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 1
Query:  274 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSXKGMKGAVQKAEEILNSTPNAY-MLQQFDNPA 717
            I ED +  IG TP+V LN I  G   NI AK+E   P  SVK RIG +MI DAE+KG +     I +E TSGNTGI LA++AA++ Y L L MP SMS+ERR LLK+ GA L+LT+   GMKGA+ KA EI++     Y +L+QF+NPA
Sbjct:    4 IYEDNSFTIGNTPLVRLNNIGNG---NILAKIESRNPSFSVKCRIGANMIWDAEKKGRLNKNIEI-IEATSGNTGIALAYVAAARNYSLTLIMPDSMSIERRKLLKSLGAHLILTNGKHGMKGAISKANEIVSLNTKRYLLLKQFENPA 148          
The following BLAST results are available for this feature:
BLAST of FC869039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_BACSU1.028e-3554.00Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
CYSK_STAAW1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAS1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAR1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAN1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAM1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAC1.342e-3555.48Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSM_BACSU8.701e-3551.33Probable cysteine synthase OS=Bacillus subtilis GN... [more]
CYSK_HAEIN5.279e-3253.02Cysteine synthase OS=Haemophilus influenzae GN=cys... [more]
CYSK_BUCAP1.536e-3153.02Cysteine synthase OS=Buchnera aphidicola subsp. Sc... [more]

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Properties
Property NameValue
Genbank descriptionC31007H03EF AbioticL1 Citrus clementina cDNA clone C31007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869039 ID=FC869039; Name=FC869039; organism=Citrus clementina; type=EST; length=718bp
GGTAGCATCATCAGTTGGTCGTCAGACAGTTAGTCCCACAAAGTTCCAAA
AACAATGGCCACTTCGTCTTCTCTGGTGTGCAGTCCGTTGACTGCTCCTC
TCTGCATCTCCAAGAAATCATCATTGGCCACTCTGAAACTGGGCTACATT
AGCCCCATAACAGCAGCTCGAAGATTGAAGCAGAATTTGTACAAGGTCTC
TTACAAACCCTGCAACTCTGTTGTGTGCAAGGCTGTCTCTGTGAAGCCGC
AGACTGGGATTGAAGGTCTCAACATTGCTGAAGATGTCACTCAGCTTATT
GGGAAGACGCCAATGGTATACCTGAATACTATTGTCAAGGGGTGTGTTGC
AAACATTGCTGCCAAGCTTGAAATCATGGAACCATGTTGTAGTGTTAAGG
ACAGGATTGGTTTCAGTATGATAGCTGATGCCGAGCAAAAAGGACTAATA
ACGCCTGGAAAGAGTATTCTTGTAGAGCCCACTAGTGGAAACACTGGAAT
TGGCCTTGCTTTCATAGCTGCTTCGAAAGGATATAAGCTCATTTTGACTA
TGCCAGCCTCAATGAGCTTGGAAAGGAGAGTTCTTCTGAAAGCATTTGGA
GCTGAGCTTGTATTAACTGATTCAGNCAAAGGCATGAAGGGGGCTGTGCA
GAAAGCTGAAGAAATTTTGAATAGCACACCTAATGCATATATGCTTCAGC
AATTTGACAATCCTGCTA
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