FC869046

Overview
NameFC869046
Unique NameFC869046
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869046 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25
Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 1
Query:  208 SVYPREPEPLKKIRDVTADHPWAM-MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADXDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVP 699
            SV  RE   L+++ D+TA  P    M   P+  Q + +L+RLV A++ +EIG FTGYS L  A  +P  G+I   D++ +   IG P  ++AGVD  I+    +A   L + L+  + +G+FD  FVDAD   Y +Y+E+ + L++ GG+   DNTL+ G VA P
Sbjct:   17 SVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAE-LRERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADP 180          
BLAST of FC869046 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 59/141 (41.84%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  277 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADXDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVP 699
            +M T  +      +L++++NAKKTI+IGVFTG S L  AL + ++G++ A DV+ E  +  L    KAGVDHKIN     A   L +L+   E E ++D+ F+DAD   Y  Y+E  +KL++ GGI   DN L  G VA P
Sbjct:   50 IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELIDQGE-ENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 189          
BLAST of FC869046 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  277 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADXDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVP 699
            +M T  +      +L++++NAKKTI+IGVFTG S L  AL + ++G++ A DV+ +  +  L    KAGVDHKIN     A   L +L+   E E ++D+ F+DAD   Y  Y+E  +KL++ GGI   DN L  G VA P
Sbjct:   49 IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELIDQGE-ENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 188          
The following BLAST results are available for this feature:
BLAST of FC869046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY7.869e-2538.79O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI4.318e-2341.84Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI9.619e-2341.13Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC31007H10EF AbioticL1 Citrus clementina cDNA clone C31007H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869046 ID=FC869046; Name=FC869046; organism=Citrus clementina; type=EST; length=700bp
GGATGTAATATTAAGCAAAAGTCAACCGCAAGTGAAAGAGAGGCCAATTG
GATAAGATTCGCCGGATTGCTGTCCTCACGTCACTGGATCTGGTCAAAAT
ATCTTATGTGAAGCAGGTGGAGAGCAATGACAGACAAAGCAAAACAAGCA
GCAAGTAGCAAGGGATTGTTGCAAAGTGAAGATTTATACAGGTATATCCT
TGAGACGAGTGTTTACCCAAGAGAGCCAGAGCCGCTGAAGAAGATAAGAG
ATGTTACTGCTGACCATCCATGGGCCATGATGGGCACTGCACCGGATGCA
GGTCAGTTAATGGCCATGCTCTTGAGGCTAGTGAATGCCAAGAAAACTAT
TGAAATTGGAGTTTTCACTGGATATTCTCTTCTCCTCACTGCACTCACAA
TTCCAGAGGATGGTCAGATTACAGCAATTGATGTGAATCGTGAAACATAT
GAAATAGGATTACCTATCATTAAAAAGGCTGGAGTTGATCACAAGATAAA
CTTCATTGAATCCGAGGCACTATCAGTTCTTGATCAGCTACTAAAATATA
GTGAAAATGAAGGCAGTTTTGACTATGCTTTTGTGGATGCCGACNAGGAC
AACTACTGTAACTACCATGAGAGGTTGATGAAGTTGTTGAAGGTGGGCGG
TATAGCTGTCTATGACAACACACTCTGGGGGGGAACAGTTGCAGTGCCTG
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