FC869212

Overview
NameFC869212
Unique NameFC869212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length401
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_SERP5 (Chaperone protein dnaK OS=Serratia proteamaculans (strain 568) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 88/133 (66.17%), Postives = 105/133 (78.95%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G   +V+ENSEG RTTPS++A+ Q GE+LVG PAKRQA TNP NTLF  KRLIGR+F D + QR+  ++ YKIV A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GGKARVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEAQRDKDIMPYKIVAADNGDAWVEVKGQRVAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOUT (Chaperone protein dnaK OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLI (Chaperone protein dnaK OS=Escherichia coli (strain K12) GN=dnaK PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLC (Chaperone protein dnaK OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL6 (Chaperone protein dnaK OS=Escherichia coli O6 GN=dnaK PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL5 (Chaperone protein dnaK OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOK1 (Chaperone protein dnaK OS=Escherichia coli O1:K1 / APEC GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECOHS (Chaperone protein dnaK OS=Escherichia coli O9:H4 (strain HS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECO57 (Chaperone protein dnaK OS=Escherichia coli O157:H7 GN=dnaK PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.057e-46
Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+EN+EG RTTPS++A+ Q GE LVG PAKRQA TNP NTLF  KRLIGR+F D + QR++ ++ +KI+ A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQA 153
The following BLAST results are available for this feature:
BLAST of FC869212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SERP57.057e-4666.17Chaperone protein dnaK OS=Serratia proteamaculans ... [more]
DNAK_ECOUT7.057e-4664.66Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLI7.057e-4664.66Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLC7.057e-4664.66Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOL67.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O6 GN=d... [more]
DNAK_ECOL57.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O6:K15:... [more]
DNAK_ECOK17.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O1:K1 /... [more]
DNAK_ECOHS7.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O9:H4 (... [more]
DNAK_ECO577.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O157:H7... [more]
DNAK_ECO247.057e-4664.66Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]

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Properties
Property NameValue
Genbank descriptionC31009G02EF AbioticL1 Citrus clementina cDNA clone C31009G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869212 ID=FC869212; Name=FC869212; organism=Citrus clementina; type=EST; length=401bp
GGGAAAGAACCCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACAC
CATCAGTTGTAGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCA
GCAAAGCGTCAGGCTGCGACCAACCCGACTAACACGCTCTTTGGCACCAA
GCGTTTAATTGGTAGAAAATTTGATGATCCCCAGACGCAAAGAGAAATGC
AGATGGTTTCATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTT
GAAGCCAATGGGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCT
GACCAAGATGAAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAA
AAGCAGTAATCACAGTTCCAGCTTATTTCAACGATGCTCAAAGGCAAGCT
A
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