FC869300

Overview
NameFC869300
Unique NameFC869300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9499 contig Ccv1_Contig9499:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25
Identity = 55/90 (61.11%), Postives = 63/90 (70.00%), Query Frame = 3
Query:  417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686
            +VFFD+   G+P GRIVM L  DVVPKTAENFRALCTGEKG+GYKG  FHR+I +FM Q             SIYG+ FEDE+F LKH G
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTG 94          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.849e-25
Identity = 57/97 (58.76%), Postives = 64/97 (65.98%), Query Frame = 3
Query:  390 VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +E   K   +VFFD+ IGG  AGRIVM L  DVVPKTAENFR LCT E+GYGYKGCSFHR+I +FM Q             SIYG  F DE+F LKH
Sbjct:  131 IEKAEKRNPQVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKH 227          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24
Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 3
Query:  414 TKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            ++VFFD+ IGGK AGRIV  L+ D+VPKTAENFRALCTGEKG G       YKG +FHR+IK FMIQ             SIYG+ FEDE+F LKH
Sbjct:   12 SRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKH 107          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 3
Query:  405 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            K+T KV+FD+  G +  GRIV+GL+G  VP+TAENFRAL TGEKG+GY+G +FHR+IKDFMIQ             SIYG+ F+DE+F L+H
Sbjct:   31 KITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRH 122          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24
Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  408 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +TTKV+FD+ I   PAGRI   LF DVVPKTAENFRAL TGEKG+GY G SFHR+I DFM+Q             SIYG  F DE+F LKH
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFGYAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKH 91          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +VFFDVDIGG+  GRIV+ LF D+VPKTAENFRALCTGEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKH 112          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +VFFDVDIGG+  GRIV+ LF D+VPKTAENFRALCTGEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKH 112          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  405 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            K+T KV+FD+  G +P GR+VMGL+G  VP+T ENFRAL TGEKG+GY+G +FHR+IK+FMIQ             SIYG  F+DE+F LKH
Sbjct:   32 KITHKVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFGYEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKH 123          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +VFFDVDIGG+  GRIV+ LF D+VPKTAENFRALCTGEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKH 112          
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24
Identity = 58/96 (60.42%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680
            +VFFDVDIGG+  GRIV+ LF D+VPKTAENFRALCTGEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKH 112          
The following BLAST results are available for this feature:
BLAST of FC869300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
PPIA_BLAGE7.541e-2561.11Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIE_DROME9.849e-2558.76Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPID_NEUCR1.286e-2459.3841 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIB_EMENI1.286e-2456.52Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIA_STRCH1.286e-2460.44Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_HUMAN1.680e-2460.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_BOVIN1.680e-2460.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIB_GIBZE1.680e-2456.52Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPID_RAT2.194e-2460.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_MOUSE2.194e-2460.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC31010G01EF AbioticL1 Citrus clementina cDNA clone C31010G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869300 ID=FC869300; Name=FC869300; organism=Citrus clementina; type=EST; length=686bp
TACAAAATCAAAAGGTCTTCCAACCTAATAGAAGCTTCTTATTAGTTATC
ACTGGCTGCAGGCTCCAGCTGCGGCAAATTTGGGCGACCCCTATTACCTA
ATCCATTGTTATGGCTTCTACTGTCTCTACTCAGATGCGGCTGCATAGCC
CCGCCCTCATTTTCCAGGGCAGTTATAGCCAAGGTGTTGCAAATGTTTGT
ATGCTACCTATGACGTCTAGCATTACAAATTCGCAGTCAGGTCATTGCCC
AGCTTCTACTTTGAAGTTGTCTGGAAGAGCATTGACATCAAGATCCCACT
ATGCATCAAGCTTTCCCATCGTACAGCTTTCTAAAGCACCTTCTGTTAAG
TATCGAAGAATGTTCTGTGTCAACTCAATGGCAAAGGATGTAGAGCTGCA
AGCAAAAGTGACAACCAAAGTTTTCTTTGACGTAGATATTGGAGGTAAAC
CTGCAGGTAGAATAGTAATGGGCCTTTTTGGAGATGTTGTTCCGAAAACA
GCTGAGAACTTTCGTGCACTGTGTACAGGTGAGAAAGGATATGGTTACAA
AGGATGCTCCTTCCACCGTATTATTAAAGATTTTATGATCCAGGGAGGGG
ACTTCACTGAGGGAGATGGAACTGGAGGCATCAGTATTTATGGTTCCAGC
TTTGAAGATGAGAGCTTTGTCTTGAAGCATGTTGGA
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