FC869310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.761e-13 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 2 Query: 257 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 460 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL + G+ W AG Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAG 136
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 2 Query: 257 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 460 P +L G P D+G+D GL +DPET N + E++HCRWAMLGA G PEL + GI W+ AG Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAG 136
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 176 TAGTRSVSVSAAAADPNRPLWFPCSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSW-------YTAGELEYFTDTT--------TLFIVEMIFIGWAEGRRWA 544 TA T+ V D + L P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W ++ G L+Y + + ++ +++ +G EG R A Sbjct: 38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 176
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 38/112 (33.93%), Postives = 57/112 (50.89%), Query Frame = 2 Query: 257 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWA 544 P +L G PGD+G+D GL +DP T N + E++HCRW MLGA G PEL + G+ W+ AG L+Y + + ++ +++ +G EG R A Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 178
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.086e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 176 TAGTRSVSVSAAAAD---PNRPLW---FPCSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAG 460 T R +V AA + P+R + F + PE+L G PGD+G+D GL +DP+T + E++H RWA+LGA GI PELL++ G+ P W+ AG Sbjct: 18 TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAG 120
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 251 TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 460 +PP +L G PGD+G+D GL +DPET N + E++HCRWA+ G PELL + G+ W+ AG Sbjct: 63 SPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAG 133
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 173 ATAGTRSVSVSAAAADPNRPLWFPCSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 415 A T +++ A R LWFP PP +L G GD GFDP GL +DP T +E+ HCR +ML G +PELL Sbjct: 353 ANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433 HSP 2 Score: 68.9366 bits (167), Expect = 2.000e-11 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 224 NRPLWFPCSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGE 463 + PLWFP + P WL+G GD GFDP GL +DP+T +E+ H R AML G +P+ L K GI WY A + Sbjct: 1 SHPLWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK-GI-----WYEAAQ 74
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.979e-12 Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 257 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAG 460 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K +G+ P W+ AG Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAG 136
BLAST of FC869310 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 257 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILN--TPSWYTAGELEYFTD 481 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K ++ P W+ AG + F+D Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGS-QIFSD 139 The following BLAST results are available for this feature:
BLAST of FC869310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869310 ID=FC869310; Name=FC869310; organism=Citrus clementina; type=EST; length=581bpback to top |