FC872950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_THEON (50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 156 KLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG-ELGQEEQDKLK 473 +L++ L V LA + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPYIYV SK++L A + P V ++ +P KG EL +E K++ Sbjct: 14 ELAEKALEAVELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVPAASVAII-EPGKGRELVEEIAMKVR 119
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_YEAST (13 kDa ribonucleoprotein-associated protein OS=Saccharomyces cerevisiae GN=SNU13 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLT 425 P A PLA L++ L +V+ AA + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Sbjct: 6 PKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITT 104
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_YARLI (13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica GN=SNU13 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 491 P A PLA L++ L +V+ A + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PYI+V SK L A RP V + Q Q K K + L+ Sbjct: 6 PKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEPIEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDKIERLLI 126
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_DEBHA (13 kDa ribonucleoprotein-associated protein OS=Debaryomyces hansenii GN=SNU13 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 491 P A PLA L++ L +V+ + + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V SK L A RP V T Q K K + L+ Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQIYGIKDKIETLLI 126
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_ASHGO (13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii GN=SNU13 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 491 P A PLA L++ L +V+ A+ + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Q K K + L+ Sbjct: 7 PKAFPLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 127
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_PYRKO (50S ribosomal protein L7Ae OS=Pyrococcus kodakaraensis GN=rpl7ae PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 153 KKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLK 473 ++L++ L V +A + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPY+YV SK++L A + P V ++ EL ++ K+K Sbjct: 13 QELAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGAAAGLEVPAASVAIIEPGKARELVEDIAMKVK 119
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_PYRFU (50S ribosomal protein L7Ae OS=Pyrococcus furiosus GN=rpl7ae PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 35/107 (32.71%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 153 KKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLK 473 K+L++ L V +A + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPYIYV SK++L A + V ++ +L +E K+K Sbjct: 13 KELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLVEEIAMKVK 119
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_NANEQ (50S ribosomal protein L7Ae OS=Nanoarchaeum equitans GN=rpl7ae PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANA 383 P K ++L+ LVR A E +++G E K++ RG L +IA N++P +++ H+P LCEE +PY+YV SKE+L A Sbjct: 6 PYVKFEVPEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKA 90
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 33/97 (34.02%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 419 P A PLA L++ L +V+ + + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V SK L A RP V Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASV 102
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_PYRHO (50S ribosomal protein L7Ae OS=Pyrococcus horikoshii GN=rpl7ae PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 153 KKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLK 473 K+L++ L V +A + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPYIYV SK++L A + V ++ +L +E K++ Sbjct: 13 KELAEKALQAVEIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLVEEIAMKVR 119 The following BLAST results are available for this feature:
BLAST of FC872950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872950 ID=FC872950; Name=FC872950; organism=Citrus clementina; type=EST; length=700bpback to top |