FC872958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_YEAST (Glutathione peroxidase 1 OS=Saccharomyces cerevisiae GN=GPX1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.819e-22 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLLKSKCWG 628 + Y F+ D +G P + + KV+LIVNVAS C TP Y EL +LYEKYK+ G I+AFPC QFG QE + EI +F ++ FPI K+ NG PVY+ LK+ G Sbjct: 2 QEFYSFSPIDENGNPFPFNSLRNKVVLIVNVASHCAFTPQ-YKELEYLYEKYKSHGLVIVAFPCGQFGNQEFEKDKEINKFCQDKYGVTFPILHKIRCNGQKQDPVYKFLKNSVSG 116
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8_HUMAN (Probable glutathione peroxidase 8 OS=Homo sapiens GN=GPX8 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.926e-22 Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 S Y F VKD G+ V L K+KGKV L+VNVAS C LT NY L L++++ F +LAFPCNQFG EP + E++ FA + FPIF K+ + G P ++ L Sbjct: 46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFL 154
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8B_XENLA (Probable glutathione peroxidase 8-B OS=Xenopus laevis GN=gpx8-B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.211e-21 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 290 YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 Y + V D G+ V LSK++GK L+VNVAS C T +NY L L+ ++ F +LAFPCNQFG EPG+N EI+ A + FP+F K+ + G P Y+ L Sbjct: 48 YSYEVTDAKGRTVALSKYRGKASLVVNVASGCPHTEANYRSLQELHREFGPSHFTVLAFPCNQFGESEPGTNKEIEAMAKRNYGVTFPVFSKIKILGSEAEPAYRFL 154
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8A_XENLA (Probable glutathione peroxidase 8-A OS=Xenopus laevis GN=gpx8-A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 290 YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 Y + V D G+ V LSK++GK L+VNVAS C +NY L L+ ++ F +LAFPCNQFG EPG+N EI A + FP+F K+ + G P Y+ L Sbjct: 48 YSYEVTDAKGRAVALSKYRGKASLVVNVASGCPHAEANYRSLQELHREFGPSHFTVLAFPCNQFGESEPGTNQEIGALAKRNYGVTFPMFSKIKILGSEAEPAYRFL 154
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_CAEEL (Glutathione peroxidase OS=Caenorhabditis elegans GN=C11E4.2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.682e-20 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 275 TEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFK--------AEFPIFDKVDVNGPNTAPVYQLLKSKC 622 T +S++DF ++ + G+ LS+++GKV+L+VNVA+ C T Y++ + + EKY+ QG ++AFPCNQF QEP N E+ T + E I+ K+DVNG N P+Y+ +K C Sbjct: 37 TNQSIFDFQIETLQGEYTDLSQYRGKVILLVNVATFCAYT-QQYTDFNPMLEKYQAQGLTLVAFPCNQFYLQEPAENHELMN-GLTYVRPGNGWTPHQELHIYGKIDVNGDNHHPLYEFVKESC 158 HSP 2 Score: 21.9422 bits (45), Expect = 4.682e-20 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 3 Query: 645 VKWNFEKFL 671 + WNFEKFL Sbjct: 181 ITWNFEKFL 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX8_DANRE (Probable glutathione peroxidase 8 OS=Danio rerio GN=gpx8 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 K Y + VKD G+ V L K++GKV L+VNVAS LT +Y L L+ + T F +LAFPC+Q+G E G++ EI+ FA + + FPIF+K+ + G P ++ L Sbjct: 46 KDFYSYEVKDARGRTVSLEKYRGKVSLVVNVASGSELTEQSYRALQELHRELGTSHFNVLAFPCSQYGDTESGTSREIEAFAKSNYGVTFPIFNKIKIMGSEAEPAFRFL 155
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_MOUSE (Epididymal secretory glutathione peroxidase OS=Mus musculus GN=Gpx5 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.031e-19 Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 284 SLYDFTVKDIDGK-DVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++YD+ ++GK D+P +++GK +L VNVA+ CGLT Y EL+ L E K G IL FPCNQFG QEPG N EI R F F +F K DVNG N ++ LK C Sbjct: 39 TIYDYEALSLNGKEDIPFKQYRGKHVLFVNVATYCGLT-IQYPELNALQEDLKPFGLVILGFPCNQFGKQEPGDNLEILPGLKYVRPGKGFLPNFQLFAKGDVNGENEQKIFTFLKRSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 1.031e-19 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX_ENCCU (Probable phospholipid hydroperoxide glutathione peroxidase OS=Encephalitozoon cuniculi GN=ECU02_0440 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.283e-19 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 281 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQLL 610 ++ Y + + DG +V L F+G V++I NVAS C SNY + L +K+ +G IL FPCNQ+ GQE EI+ ++ F +FDKVDV G PV++ L Sbjct: 8 EAFYGLSARGWDGSEVSLGSFRGCVIMIANVASSCKFAESNYKSFAGLLDKFYRKGLRILLFPCNQYLGQESRPIEEIRGEVSKKYSDRFVVFDKVDVFGKGAHPVFRHL 117 HSP 2 Score: 27.335 bits (59), Expect = 2.283e-19 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 627 GILGDLVKWNFEKFL 671 G LG+ +KWNF KFL Sbjct: 125 GRLGNFIKWNFTKFL 139
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX6_RAT (Glutathione peroxidase 6 OS=Rattus norvegicus GN=Gpx6 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.427e-18 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ +DG + V ++ GK +L VNVAS CGLT + Y EL+ L E+ + +L FPCNQFG QEPG N EI R F F +F+K DVNG N V+ LKS C Sbjct: 39 TVYEYGANTLDGGEYVQFQQYAGKHILFVNVASFCGLT-ATYPELNTLQEELRPFNVSVLGFPCNQFGKQEPGKNSEILLGLKYVRPGGGFVPNFQLFEKGDVNGDNEQKVFSFLKSSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 1.427e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_BOVIN (Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.854e-18 Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTR-------FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622 ++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ + G IL FPCNQFG QEPG N EI A + F F +F+K DVNG Y LK+ C Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLT-GQYVELNALQEELEPFGLVILGFPCNQFGKQEPGENSEI--LATLKYVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 1.854e-18 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 VKWNFEKFLSG 677 ++WNFEKFL G Sbjct: 179 IRWNFEKFLVG 189 The following BLAST results are available for this feature:
BLAST of FC872958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872958 ID=FC872958; Name=FC872958; organism=Citrus clementina; type=EST; length=678bpback to top |