FC872959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_AERPE (30S ribosomal protein S10P OS=Aeropyrum pernix GN=rps10p PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.203e-12 Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEV 443 K+RI L S NV++LE V + A +R++GPV +P K L + + P GEG+ W+ +E++VHKR+IDL + V++ + I + V +E+ Sbjct: 4 KLRIWLWSTNVRSLENVVEQIRNIANKTGIRMRGPVPLPVKRLEVPVFRLPHGEGSKYWEHWEMKVHKRLIDLEADERVLRHLMRIKVPEDVYIEI 99
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULTO (30S ribosomal protein S10P OS=Sulfolobus tokodaii GN=rps10p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11 Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S N++NL V + A+ + + GP+ +PT + + + P GEG W+ +E+++HKR+ID+ S V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNIENLNFVVNQIKTLAQKTGVEISGPIPLPTSRMEVPVMRLPHGEGKKKWEHWEMKIHKRIIDIASDERVMRQLMRVRVPDDVYIEIEL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULAC (30S ribosomal protein S10P OS=Sulfolobus acidocaldarius GN=rps10p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 30/98 (30.61%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S N+ +L V + A+ ++V GP+ +PT + + + P GEG W+ +E++VHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_METS5 (30S ribosomal protein S10P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps10p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 32/100 (32.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 153 HKIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 +K RI L S NV NL V ++G DK + ++GP+ +PT+ + + + P GEG W+++E+ +HKR+ID+ + V++Q+ + + V +E+ + Sbjct: 3 NKARIRLWSTNVNNLNYVVNQ-IKGIVDKTGVSMRGPIPLPTRRMEVPVMRLPHGEGRKKWEKWEMSLHKRIIDISADERVMRQLMRVKVPEDVYIEIQL 101 The following BLAST results are available for this feature:
BLAST of FC872959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872959 ID=FC872959; Name=FC872959; organism=Citrus clementina; type=EST; length=765bpback to top |