FC875267

Overview
NameFC875267
Unique NameFC875267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 47/125 (37.60%), Postives = 65/125 (52.00%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRF+PTDE++++    ++      +V  I EIDLY ++PWELP    +  E+E WYFF     K     R  R    GYWK TG    I      + +G KK L F     A + +KT W++HE
Sbjct:   10 GFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELP-GLALYGEKE-WYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIG---LPKPVGIKKALVFYA-GKAPKGEKTNWIMHE 128          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRF+PTDE++++    +R      +V  I EIDLY F+PW+LP    +  E+E WYFF     K     R  R    GYWK TG    +      + +  KK L F     A + +KT W++HE
Sbjct:   12 GFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLP-RMALYGEKE-WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVG---SPKPVAIKKALVFYA-GKAPKGEKTNWIMHE 130          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14
Identity = 46/131 (35.11%), Postives = 65/131 (49.62%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENS 511
            GFRF+PTDE++I+     +       V  I E+D+Y F+PW+LP  +E    E  WYFF     K     R  R    GYWK TG    I     +  +G KK L F +     +  KT+W++HE  + +S
Sbjct:   12 GFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENE--WYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHS--GSSNVGVKKALVFYK-GRPPKGIKTDWIMHEYRLHDS 137          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.420e-14
Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKR------RDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENS--PDFEVLASVLELHMCCEI 565
            GFRF+P D++++    M+R      R P       + ++DL   EPW++P  + +  ++  WYF+ +   K A   R  R T  GYWK TG+   I RK K  ++G +K L F +  A   + KT+WV+HE  ++ S  P    L+S  E  + C +
Sbjct:   22 GFRFHPKDDELVCDYLMRRSLHNNHRPPL-----VLIQVDLNKCEPWDIPKMACVGGKD--WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGK--LVGMRKTLVFYQGRAPRGR-KTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRV 168          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQS-EEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSP 514
            GFRF+PT+E+++     K+ +     +  I+E+DL   EPW++     I S  +  WYFF     K     R  R T  G+WK TGR   I    +   IG +K L F +   A    K++W++HE  ++++P
Sbjct:   19 GFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRR--IGLRKTLVFYK-GRAPHGQKSDWIMHEYRLDDTP 148          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 46/130 (35.38%), Postives = 62/130 (47.69%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEI-QSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVE 505
            GFRF+PTDE+++     K+       +  I+EIDL   EPW+L     I    +  WYFF     K     R  R T  G+WK TGR   I        IG +K L F    A   K KT+W++HE  ++
Sbjct:   13 GFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACR-IGMRKTLVFYVGRAPHGK-KTDWIMHEYRLD 140          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 46/125 (36.80%), Postives = 58/125 (46.40%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRF+PTDE+++      R       V  I E+DLY  +PW+LP H  +    E WYFF     K     R  R    GYWK TG    +    +T   G KK L F          KTEW++HE
Sbjct:   20 GFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLP-HRALFGRRE-WYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRT--AGIKKALVFYH-GKPPRGVKTEWIMHE 139          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13
Identity = 40/125 (32.00%), Postives = 58/125 (46.40%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 493
            GFRF+PTD+++++    ++      +   I E+DLY F PW+LP        E+ WYFF     K    +R  R    GYWK TG    +        +  KK L F       +  KT W++HE
Sbjct:   12 GFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLP--ERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVG---SPRAVAIKKALVFYA-GKPPKGVKTNWIMHE 130          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.943e-13
Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = 2
Query:  104 MDSLVGFRFYPTDEQII-LLLTMKRRDPAGFSVRT-IKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYK------TEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFE 523
            M+  VGF F P DE+++   L  K        V   I E+++ S++PW L   S+ +S + +WYFF     +N +  R  R T  G WK TG    +K ++          IG K++L F  D    +K K++WVIHE   +  P+ +
Sbjct:    1 MEDQVGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSR--RENNKGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVF-LDGRYPDKTKSDWVIHEFHYDLLPEHQ 145          

HSP 2 Score: 21.1718 bits (43), Expect = 8.943e-13
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  618 QKDFVVCRLERNG 656
            Q+ +V+CRLE  G
Sbjct:  145 QRTYVICRLEYKG 157          
BLAST of FC875267 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12
Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEI-QSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENS 511
            GFRF+PT+E+++     K+ +     +  I+++DL   EPW++    +I  + +  WYFF     K     R  R T  G+WK TGR   I    +   IG +K L F +   A    K++W++HE  ++++
Sbjct:   19 GFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRR--IGMRKTLVFYK-GRAPHGQKSDWIMHEYRLDDN 147          
The following BLAST results are available for this feature:
BLAST of FC875267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NAC2_ARATH6.890e-1537.60NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC48_ORYSJ1.175e-1436.80NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC29_ARATH1.175e-1435.11NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC22_ARATH3.420e-1432.48NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC12_ARATH9.949e-1432.33NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC76_ORYSJ2.216e-1335.38NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC67_ORYSJ2.216e-1336.80NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC71_ORYSJ8.423e-1332.00NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC1_ARATH8.943e-1331.76NAC domain-containing protein 1 OS=Arabidopsis tha... [more]
NAC43_ARATH1.100e-1230.30NAC domain-containing protein 43 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC31402A11EF CTVClemen1 Citrus clementina cDNA clone C31402A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875267 ID=FC875267; Name=FC875267; organism=Citrus clementina; type=EST; length=678bp
GACTGGCTCTTTTAAGATTTTGCTGACCAAATTGGAAAGAAGAAGCTCTT
ACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAATCAGAAA
CCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGAACAAAT
TATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCTCCGTCC
GTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGAGCTACCC
TGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTTCTGTGA
ACCTTGTTACAAAAATGCCGAGAGTAAACGGGTACGTAGAAGAACAAAGG
AAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGCAAATAC
AAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCGCGATGA
TGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGATAGCTG
TTGAAAATAGCCCTGACTTTGAGGTATTAGCCTCTGTTTTAGAACTGCAT
ATGTGTTGTGAAATTGTCTGTTTATTTTCTTGAAAAATAATTGTAAAATA
CTCTGTTCCTGTTATTGCAGAAGGATTTTGTTGTGTGTCGCCTTGAAAGA
AACGGGAGAAGAGACGCTTGGTGTTGTT
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