FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 + LK+T L++ H+A G KMV F GW MP+QY+ I E R LFDVSHM + + G F+++LV D++ L PG + N GG++DD ++ +++D LVVNA DKD Sbjct: 2 QELKRTPLYNIHLAAGAKMVEFGGWLMPVQYEGIIAEHQA-VRSAAGLFDVSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKD 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAES (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT + S Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTVDVSNTS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAEQ (Aminomethyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 +LKKT L+ +V +G K+V F GW+MP+Q+ SI E R N LFDVSHM + + GKD F++ ++ D L + N+ GG IDD V K+ ++H L+VNA +KD I+ H +FT + S Sbjct: 4 DLKKTPLYQNYVDSGAKIVEFGGWAMPVQFS-SIKEEHNAVRYNVGLFDVSHMGEIEISGKDAEQFIQYILSNDTNLLTNDKAMYSALCNDEGGIIDDLVTYKLNENHYLLIVNAANTNKDYQWIKKHSSNFTVDVSNTS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ERWCT (Aminomethyltransferase OS=Erwinia carotovora subsp. atroseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20 Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L+ H+A+G KMV F GW MP+ Y + E + R++ +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ + +D+ LVVN+ R+KDLA IE H +F Sbjct: 3 KQTPLYQQHLADGAKMVDFHGWMMPLHYGSQLDEHHI-VRRDAGIFDVSHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEQHAAAF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BORPA (Aminomethyltransferase OS=Bordetella parapertussis GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20 Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 LK+T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV+ Sbjct: 5 LKRTPLAEEHLAAGARMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGRALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVA 140
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BORBR (Aminomethyltransferase OS=Bordetella bronchiseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20 Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 LK+T L + H+A G +MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV+ Sbjct: 5 LKRTPLAEEHLAAGARMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVA 140
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19 Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +NLKKT L D + GK++ FAGW++P+Q++ I E R LFDVSHM +++KG++ FL+ L+ D++ L T N NGG +DD ++ K D+H LVVNA +KD Sbjct: 2 DNLKKTPLFDLYKKYNGKIIDFAGWALPVQFESIISEHEA-VRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKDNQVFYTFMCNYNGGVVDDLLVYKYSDEHFLLVVNAANIEKD 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_YERE8 (Aminomethyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvT PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L+D HVA G +MV F GW MP+ Y I E + RQ+ +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ +++D+ LVVN+ R+KDL I H + + Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHI-VRQDAGMFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTAMLNASGGVIDDLIVYFLREDYFRLVVNSATREKDLNWIIQHAEPY 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PSEHT (Aminomethyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvT PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 55/123 (44.72%), Postives = 69/123 (56.10%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHI 590 KT L+ H+ G KMV F GW MPI Y I E R + +FDVSHM + ++G+ FL+KLV DVA L PG T NE GG IDD +I + LVVN+ R+KDLAH+ Sbjct: 4 KTVLYAKHLEAGAKMVDFHGWEMPINYGSQIEEHNA-VRNDAGMFDVSHMTIVDIQGEQAQAFLQKLVANDVAKLTVPGKALYTPMLNEQGGVIDDLIIYFFSNTSYRLVVNSATREKDLAHL 125
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PECCP (Aminomethyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvT PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L+ H+A+G KMV F GW MP+ Y + E + R+ G +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ + +D+ LVVN+ R+KDLA IE H F Sbjct: 3 KQTPLYQQHLADGAKMVDFHGWMMPLHYGSQLDEHHIVRREAG-IFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEQHAAPF 132 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |