FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACHD (Aminomethyltransferase OS=Bacillus halodurans GN=gcvT PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 LKKT L D + GGK++ F GW++P+Q+ SI E R LFDVSHM + + G + +L++LV DV+ + G T ENGG++DD +I + +D LV+NA DKD+A +E H Sbjct: 4 LKKTPLFDLYEQYGGKVIDFGGWALPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEVTGAQALNYLQRLVTNDVSKIKDGQAQYTAMCYENGGTVDDLLIYRRSEDQYLLVINAANIDKDIAWMEKH 129
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAB (Aminomethyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAARYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGVIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SERP5 (Aminomethyltransferase OS=Serratia proteamaculans (strain 568) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20 Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 K+T L+D HVA G +MV F GW MP+ Y I E RQ+ +FDVSHM + L+G FL L+ DVA L PG T N +GG IDD ++ + +D+ LVVN+ R+KDLA IE H Sbjct: 3 KQTPLYDQHVACGARMVDFHGWMMPLHYGSQIDEHHA-VRQDAGMFDVSHMTIVDLRGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEEH 128
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NATTJ (Aminomethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIE 593 +KT L+D H GGK++ F GW +P+Q+ I++ + R+ LFDVSHM + ++G + +L+K+V DVA L PG T ENGG++DD +I K+ ++ L+VNA DKD ++ Sbjct: 5 QKTPLYDIHKERGGKIIDFGGWYLPVQFT-GIIDEVMTTRKEAGLFDVSHMGEIIVEGPKALEYLQKMVPNDVARLKPGKILYTPMCYENGGTVDDFLIYKMDENKFLLIVNAANTDKDFEWLQ 127
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 213 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +NLKKT L + + GK++ FAGW++P+Q++ I E R LFDVSHM +++KG++ FL+ L+ D++ L T N NGG +DD ++ K D+H YLVVNA +KD Sbjct: 2 DNLKKTPLFELYKKYNGKIIDFAGWALPVQFESIISEHEA-VRNAAGLFDVSHMGEITVKGREAFNFLQNLITNDLSKLKGNQVLYTFMCNYNGGVVDDLLVYKYSDEHFYLVVNAANIEKD 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAW (Aminomethyltransferase OS=Staphylococcus aureus (strain MW2) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAT (Aminomethyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAS (Aminomethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAR (Aminomethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=gcvT PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STAAN (Aminomethyltransferase OS=Staphylococcus aureus (strain N315) GN=gcvT PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 210 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 + +LK+T L+ +V G K+V F GW+MP+Q+ SI E R LFDVSHM + + GKD F++ L+ D L T NE GG IDD VI K+ DD+ LVVNA +KD I H + F + +VS Sbjct: 2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS 142 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |