FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:223..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SILPO (Chaperone protein dnaK OS=Silicibacter pomeroyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.527e-68
Identity = 133/234 (56.84%), Postives = 171/234 (73.08%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD ERL+G  AK Q   NP+NT+F  KRLIGRR  DA V  D K+ PF ++ G        V  KGE+  ++  +IS+++L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      + + ++DLGGGTFDV++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D+SG+  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDEERLVGQPAKRQAVTNPSNTIFGVKRLIGRRVDDAEVTKDKKMVPFTIVNGGNGDAW--VEAKGEK--YSPSQISAVILGKMKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----NSQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLSGDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.579e-68
Identity = 133/235 (56.60%), Postives = 170/235 (72.34%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT++ ERL+G  AK Q   N  NTV+  KRLIGR+++   VQ D  + PFK+   P     I V  +     ++  EISSMVL+KM++ AE YLG  I +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + EG+FEVK+T GDTHLGGEDFD R++++ V EFK+ +  DI  +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTESGERLVGQVAKRQAVTNSENTVYAVKRLIGRKYNSKEVQYDKSISPFKISEAPNGDAQIEVRGRA----YSPAEISSMVLVKMKQTAEDYLGEKITDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTHLGGEDFDQRIIDYLVSEFKKDQGIDIRSDKMALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.293e-67
Identity = 130/234 (55.56%), Postives = 173/234 (73.93%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD+ERL+G  AK Q   NP+NTVF  KRLIGRR +DA V+ D KL P+ ++ G      + V  +G++  ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDSERLVGQPAKRQAVTNPSNTVFAVKRLIGRRTTDAEVEKDKKLVPYAIVDGGNGDAWVEV--RGDK--YSPSQISAFILQKMKETAESYLGEPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DSKTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTKDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.880e-67
Identity = 134/235 (57.02%), Postives = 173/235 (73.62%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F  D ERL+G AAK Q  +NP NT+F  KRLIGR+F+DA VQ D+K  P+K++          V  +GE+  ++  +I   VL KM+E AE YL   +KNAVVTVPAYFNDSQRQATKDAG IAGLNV+R++NEPTAAA+AYGL+K+A  V    V ++DLGGGTFD+S+L I++G+FEVK+T GDTHLGGEDFD  +V H VQ+FK++   D+S +  A++R+R A
Sbjct:   73 RTTPSVVAFAQDGERLVGIAAKRQAVVNPENTLFATKRLIGRKFTDAEVQRDIKEVPYKIVQHTNGDAW--VEARGEK--YSPAQIGGFVLGKMKETAENYLSKPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVVNEPTAAALAYGLEKEADRV----VAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTHLGGEDFDISLVRHIVQQFKKESGLDLSNDRMAIQRIREA 299          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_JANSC (Chaperone protein dnaK OS=Jannaschia sp. (strain CCS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.761e-67
Identity = 127/234 (54.27%), Postives = 170/234 (72.65%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD ERL G +AK Q   NP NT+F  KRLIGRR +D  ++ D K  PF+++ G      +    K + + ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    + + ++DLGGGTFDV++L I++G+FEVK+T GDT LGGEDFD R+VN+  +EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDDERLAGQSAKRQAVTNPENTIFGVKRLIGRRINDEHLEKDKKNLPFEIVDGGNGDAWV----KAKGETYSPSQISAFILQKMKETAESYLGEDVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKET----RTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLAEEFKKENSVDLTQDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.416e-67
Identity = 132/235 (56.17%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NPTNT+F  KRLIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFKR    D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.416e-67
Identity = 132/235 (56.17%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NPTNT+F  KRLIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFKR    D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVGEFKRDNGIDLKNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHIEC (Chaperone protein dnaK OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dnaK PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.416e-67
Identity = 131/235 (55.74%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NPTNT+F  KRLIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+    D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFSIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKKDNGIDLKNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHIE6 (Chaperone protein dnaK OS=Rhizobium etli (strain CIAT 652) GN=dnaK PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.416e-67
Identity = 131/235 (55.74%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NPTNT+F  KRLIGRR+ D +V+ D  L PF ++ G      +  N KG    ++  +IS+M+L KM+E AE+YLG  ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK+    D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFSIVKGDNGDAWVEANGKG----YSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKKDNGIDLKNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: HSP7C_TRYBB (Heat shock cognate HSP70 protein OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.380e-67
Identity = 128/216 (59.26%), Postives = 157/216 (72.69%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 648
            RTTPSYV F + E L+GDAAK+  A      +FDAKRLIGR+FSD+ VQ DMK WPFKV  G     ++ V + GE      E+IS+ VL  ++  AE+YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYGLD KA    E+NVL+FD GGGTFDVS++++  G+FEVKAT GDTHLGGED D  ++ H + + + +
Sbjct:   36 RTTPSYVAFVNNEVLVGDAAKSHAARGSNGVIFDAKRLIGRKFSDSVVQSDMKHWPFKVEEGEKGGAVMRVEHLGEGMLLQPEQISARVLAYLKSCAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYGLD-KADEGKERNVLVFDFGGGTFDVSIISVSGGVFEVKATNGDTHLGGEDVDAALLEHALADIRNR 250          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SILPO1.527e-6856.84Chaperone protein dnaK OS=Silicibacter pomeroyi GN... [more]
DNAK_SYNAS7.579e-6856.60Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
DNAK_PARDP1.293e-6755.56Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
HSP7M_EMENI2.880e-6757.02Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
DNAK_JANSC3.761e-6754.27Chaperone protein dnaK OS=Jannaschia sp. (strain C... [more]
DNAK_RHILW6.416e-6756.17Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL36.416e-6756.17Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIEC6.416e-6755.74Chaperone protein dnaK OS=Rhizobium etli (strain C... [more]
DNAK_RHIE66.416e-6755.74Chaperone protein dnaK OS=Rhizobium etli (strain C... [more]
HSP7C_TRYBB8.380e-6759.26Heat shock cognate HSP70 protein OS=Trypanosoma br... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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