FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:223..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_COXB2 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G +AK Q   N   T++  KRLIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+ +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGASAKRQAVTNADRTLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEA 270          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_COXB1 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuK_Q154) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G +AK Q   N   T++  KRLIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+ +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGASAKRQAVTNADRTLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEA 270          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_WOLTR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 125/235 (53.19%), Postives = 167/235 (71.06%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT + ERLIG  AK Q   N +NT F  KRLIGR++ D  ++ D+ + P+KV A       I      + K+++  +I + +L  ++E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RI+NEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +V++ + EFK+     +  +P A++R++ A
Sbjct:   30 RTTPSVVAFTSSGERLIGAPAKRQATTNASNTFFATKRLIGRQYGDPEMK-DLNV-PYKVFAAKNGDAWIKTT---DGKEYSPSQIGAFILQNLKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNAIVSYLLDEFKKSNGIGLKNDPMAMQRIKEA 255          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SOLUE (Chaperone protein dnaK OS=Solibacter usitatus (strain Ellin6076) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 122/235 (51.91%), Postives = 167/235 (71.06%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT + ERL+G  AK Q   NP NTVF  KR +GRR+ +  V  +MK+ P+KV+ G      + +      K+++  EIS+M+L K++E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V+RIINEPTAAA+AYGLDKK      + + ++D GGGTFD+S+L + EG+ EVK+T GDTHLGG++ D R+++  V EFK++   D+S +  AL+RL+ A
Sbjct:   34 RTTPSVVAFTKSGERLVGQVAKRQAITNPENTVFSIKRFMGRRYDE--VNEEMKMVPYKVVRGENGDARVDIM----GKKYSPPEISAMILTKLKEAAESYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKK----NETIAVYDFGGGTFDISVLEVGEGVVEVKSTNGDTHLGGDNIDQRVIDWIVSEFKKENGIDLSKDQMALQRLKEA 258          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_MYXXD (Chaperone protein dnaK OS=Myxococcus xanthus (strain DK 1622) GN=dnaK PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 125/236 (52.97%), Postives = 165/236 (69.92%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQ-XDISGNPRALRRLRTA 702
            RTTPS VGFTD+ ERL+G  AK Q   NP NTVF AKRLIGR+F     +  + + PFKV + P     + +  KG    ++  E+S++VL+KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V+RIINEPTAAA+AYGLD K    G + + ++DLGGGTFD+S+L +  G+FEVK+T GDT LGGEDFD R++++  + F       D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVGFTDSGERLVGQIAKRQAITNPENTVFAAKRLIGRKFDSPEGKKAIGVSPFKVASSPNGDAWVEIRGKG----YSPPEVSAIVLMKMKQTAEDYLGEQVSEAVITVPAYFNDSQRQATKDAGRIAGLSVLRIINEPTAAALAYGLD-KVQDGGTERIAVYDLGGGTFDISILELNAGVFEVKSTNGDTFLGGEDFDQRLIDYLAKRFAESNNGLDLRKDRMALQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPD (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 121/235 (51.49%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT + +RL+G AAK Q   NP NT++  KR +GR+F +  V  + KL P+ ++    +        K  +K ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK +S   + V +FDLGGGTFD+S+L + +G+FEVK+T GDTHLGG+DFD +++N    EFK+++  D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFTKSGDRLVGQAAKRQAITNPKNTIYSIKRFVGRKFDE--VPNEKKLAPYDIVNEGGE-----ARVKINDKAYSPQEISAMILQKMKQTAEDFLGEKVSEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKQSS---EKVAVFDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQKIINFLADEFKKQEGIDLRNDAIALQRLKEA 258          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_BLOFL (Chaperone protein dnaK OS=Blochmannia floridanus GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 127/237 (53.59%), Postives = 169/237 (71.31%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            RTTPS V +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+K+ P+K+I+       + +  KG++   A  +IS+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+A   G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+ ++N+ V+EFK+ +  D+  +P A++RL+
Sbjct:   34 RTTPSVVAYTQDGEILVGQPAKRQSVTNPKNTLFAIKRLIGRRFQDQEVQRDVKIMPYKIISSNNGDAWLDI--KGQK--IAPPQISAEILKKMKKTAEDYLGENVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKEAH--GNRIIAVYDLGGGTFDISIIEIDNVDGEKTFEVLATNGDTHLGGEDFDSLLINYLVEEFKKDQGIDLYNDPLAMQRLK 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.758e-62
Identity = 121/235 (51.49%), Postives = 165/235 (70.21%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NP  T F  KRL+GRR+ D  V+ D KL P+K++        +    + + K ++  ++S+ +L KM+E AEA+LG+ +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK    V    + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V++   EF++++  ++  +  AL+RL+ A
Sbjct:   34 RTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADAKTYSPSQVSAFILQKMKETAEAHLGAKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKAKAGV----IAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVSYLADEFQKEQGINLRNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.758e-62
Identity = 122/233 (52.36%), Postives = 166/233 (71.24%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            RTTPS V FT + ERL+G AAK Q   N  NT++  KR IGR+FS+  VQ ++K  P+KVI G      + V   GE + +  +EIS+ +L+K++  AE+ LG  I  AV+TVPAYFNDSQRQATK AG IAGL V+RIINEPTAA++AYGLDKK     ++ + ++DLGGGTFD+S+L I EG+FEVKAT GDTHLGG+D+D  ++   + +FK++   D+ G P A++R++
Sbjct:   34 RTTPSIVAFTKSGERLVGQAAKRQAITNSKNTIYSIKRFIGRKFSE--VQEEIKRVPYKVIEGKNGDCAVEVEVAGERRVYTPQEISAFILMKLKADAESKLGEKITQAVITVPAYFNDSQRQATKAAGEIAGLEVLRIINEPTAASLAYGLDKKK----DERIAVYDLGGGTFDISVLEIGEGVFEVKATNGDTHLGGDDWDAAIMEWIISDFKKETGIDLHGQPDAVQRIK 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_ALCBS (Chaperone protein dnaK OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaK PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.758e-62
Identity = 130/239 (54.39%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +TD  E L+G AAK Q   NP NT++  KRLIGRRF D  VQ D+K+ P+K+    AD     V  KGE+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD  ++N    +FK     D+ G+P A++RL+ A
Sbjct:   34 RTTPSIIAYTDDKETLVGQAAKRQAVTNPENTLYAVKRLIGRRFDDKVVQKDIKMVPYKITK--ADNGDAWVEVKGEK--MAPPQISAQVLKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLALINFLADQFKADSGIDLGGDPLAMQRLKEA 265          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_COXB22.790e-6253.75Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXB12.790e-6253.75Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_WOLTR3.643e-6253.19Chaperone protein dnaK OS=Wolbachia sp. subsp. Bru... [more]
DNAK_SOLUE3.643e-6251.91Chaperone protein dnaK OS=Solibacter usitatus (str... [more]
DNAK_MYXXD3.643e-6252.97Chaperone protein dnaK OS=Myxococcus xanthus (stra... [more]
DNAK_CHLPD3.643e-6251.49Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_BLOFL3.643e-6253.59Chaperone protein dnaK OS=Blochmannia floridanus G... [more]
DNAK_RHOPB4.758e-6251.49Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METI44.758e-6252.36Chaperone protein dnaK OS=Methylacidiphilum infern... [more]
DNAK_ALCBS4.758e-6254.39Chaperone protein dnaK OS=Alcanivorax borkumensis ... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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