FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:223..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 121/235 (51.49%), Postives = 165/235 (70.21%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F+D  ERL+G  AK Q   NP  T F  KRL+GRR+ D  V+ D KL P+K++        +    + + + ++  ++S+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK  T  G   + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V++   EF++++  ++  +  AL+RL+ A
Sbjct:   34 RTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDK--TKAG--TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDMRLVSYLADEFQKEQGINLRNDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_METCA (Chaperone protein dnaK OS=Methylococcus capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 126/237 (53.16%), Postives = 167/237 (70.46%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            RTTPS V FT D E L+G +AK Q   NP NT+F  KRLIGRR+ D  VQ D+K+ P+ ++        + V      K+ A  EIS+ VL+K+++ AEAYLG  +K AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DK   S G++ + ++DLGGGTFD+S++ I     E  FEV +T GDT LGGEDFD R++ + V EF++++  D+  +P AL+RL+
Sbjct:   34 RTTPSIVAFTADNEVLVGQSAKRQAITNPKNTLFAIKRLIGRRYKDDVVQKDIKMVPYTIVEAENGDAWVEVG----GKKMAPPEISARVLMKLKKDAEAYLGEEVKEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGMDK---SRGDQKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLSTNGDTFLGGEDFDLRIIEYIVDEFRKEQGIDLHNDPLALQRLK 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+KV        +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK+    G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK+++  D+S +  AL+RL+ A
Sbjct:   40 RTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKE----GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDA 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+KV        +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK+    G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK+++  D+S +  AL+RL+ A
Sbjct:   40 RTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKE----GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDA 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+KV        +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK+    G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK+++  D+S +  AL+RL+ A
Sbjct:   40 RTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKE----GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDA 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F   E L+G  AK Q   NP  T+   KR IGR+FS+  V+ ++K  P+KV        +  V    E+K +  EEI + +L+KM+E AEAYLG T+  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK+    G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK+++  D+S +  AL+RL+ A
Sbjct:   40 RTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV----EQKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKE----GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDA 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_BLOPB (Chaperone protein dnaK OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 123/239 (51.46%), Postives = 169/239 (70.71%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K+I+  AD     ++ KG++   A  ++S+ +L KM++ AE YLG  I  AV+TVPAYFND+QRQATKD+G IAGL V RIINEPTAAA+AYGLDK+    G + + ++DLGGGTFD+S++ I+    E  FEV +T GDTHLGGEDFD+ ++N+   EFK+ ++ ++  +P A++RL+ A
Sbjct:   34 RTTPSIIAYTQDGEILVGQPAKRQSVTNPKNTLFAIKRLIGRRFQDTEVQRDVNIMPYKIIS--ADNGDAWLDVKGQK--MAPPQVSAEILKKMKKTAEDYLGEQISEAVITVPAYFNDAQRQATKDSGRIAGLEVKRIINEPTAAALAYGLDKETR--GNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLSTNGDTHLGGEDFDSLLINYLADEFKKDQRINLYNDPLAMQRLKEA 266          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 123/235 (52.34%), Postives = 166/235 (70.64%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDI--SGNPRALRRLR 696
            RTTPS VGFT T ERL+G  AK Q   NP NT+F  KR +GRR+++  V  +MK+ P+KV        ++      + K+++  EIS+ +L K+++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK     ++ + ++D GGGTFD+S+L + EG+ EVK+T GDTHLGG++ D R+V   + EFK+K+  D+   GN  AL+RLR
Sbjct:   34 RTTPSVVGFTKTGERLVGQVAKRQAITNPENTIFSIKRFMGRRYNE--VNEEMKMVPYKVQQAGDHVAVLA-----QGKEYSPAEISAYILQKLKKAAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAYGLDKKK----DETIAVYDFGGGTFDISILEVGEGVIEVKSTNGDTHLGGDNIDQRIVEWLIDEFKKKEGLDLRAKGNEMALQRLR 257          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.261e-61
Identity = 128/239 (53.56%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V EF + +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDA 266          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.261e-61
Identity = 128/239 (53.56%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G AAK Q   NP NT +  KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD R++++ V EF + +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDA 266          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHOP24.028e-6151.49Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METCA4.028e-6153.16Chaperone protein dnaK OS=Methylococcus capsulatus... [more]
DNAK_CHLTR4.028e-6152.14Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB4.028e-6152.14Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA4.028e-6152.14Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT24.028e-6152.14Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_BLOPB4.028e-6151.46Chaperone protein dnaK OS=Blochmannia pennsylvanic... [more]
DNAK_ACIBL4.028e-6152.34Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
DNAK_XYLFT5.261e-6153.56Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM5.261e-6153.56Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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