FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:223..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLFF (Chaperone protein dnaK OS=Chlamydophila felis (strain Fe/C-56) GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61
Identity = 121/234 (51.71%), Postives = 164/234 (70.09%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F  +E L+G  AK Q   NP  T+   KR IGR++S+  V+ ++K  P+KV +G     +  V    E KQ+  EEI + +L+KM+E AEAYLG TI  AV+TVPAYFNDSQR +TKDAG IAGL+V RII EPTAAA+AYG+DK     G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++   ++EF++++  D+  +  AL+RL+ A
Sbjct:   40 RTTPSIVAFKGSETLVGIPAKRQAVTNPEKTLASTKRFIGRKYSE--VESEIKTVPYKVTSGSNGDAVFQV----EGKQYTPEEIGAHILMKMKETAEAYLGETITEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDK----AGDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDEVIIKWMIEEFQKQEGIDLGKDNMALQRLKDA 263          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBP (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 125/235 (53.19%), Postives = 163/235 (69.36%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT   E ++G  AKNQ   N  NT+  AKR IGRRF++A    + K+  +KVI    D    GV ++    +F  +EI++ VL KM++ AE +LG  +K AVVTVPAYFND QRQATKDAG IAGL V RIINEPTAAA+AYG DKK T+     + ++DLGGGTFDVS+L + +G+FEVK+T GDTHLGG+DFDN ++   + EFK++   DISG+   ++RL+ A
Sbjct:   36 RTTPSIVAFTAKGETIVGQFAKNQAITNAVNTIRSAKRFIGRRFNEAG--DESKMVSYKVIRAGND----GVKFETVSGEFTPQEIAARVLQKMKKTAEDFLGHEVKKAVVTVPAYFNDEQRQATKDAGRIAGLEVERIINEPTAAALAYGFDKKKTNA---KIAVYDLGGGTFDVSILELGDGVFEVKSTNGDTHLGGDDFDNVVMQWMIDEFKKQTGIDISGDKNTVQRLKEA 261          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBA (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 125/235 (53.19%), Postives = 163/235 (69.36%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT   E ++G  AKNQ   N  NT+  AKR IGRRF++A    + K+  +KVI    D    GV ++    +F  +EI++ VL KM++ AE +LG  +K AVVTVPAYFND QRQATKDAG IAGL V RIINEPTAAA+AYG DKK T+     + ++DLGGGTFDVS+L + +G+FEVK+T GDTHLGG+DFDN ++   + EFK++   DISG+   ++RL+ A
Sbjct:   36 RTTPSIVAFTAKGETIVGQFAKNQAITNAVNTIRSAKRFIGRRFNEAG--DESKMVSYKVIRAGND----GVKFETVSGEFTPQEIAARVLQKMKKTAEDFLGHEVKKAVVTVPAYFNDEQRQATKDAGRIAGLEVERIINEPTAAALAYGFDKKKTNA---KIAVYDLGGGTFDVSILELGDGVFEVKSTNGDTHLGGDDFDNVVMQWMIDEFKKQTGIDISGDKNTVQRLKEA 261          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 120/234 (51.28%), Postives = 166/234 (70.94%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT  ERL+G+ AK Q   NP  T+F  KRL+GRR+    V+  ++  P+K++ G      + V    E K+++  EIS+++L K+++ AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAA++AYG DKKA     + + +FDLGGGTFD+S+L + + + EV+AT GDT LGGEDFD+R++++ V EFK++   D+S +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTK-ERLVGEIAKRQAVTNPERTIFAIKRLMGRRYDAPEVKHWLEHCPYKIVEGQGGDAYVEV----EGKKYSPAEISAIILGKLKKDAEAYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAASLAYGFDKKA----NEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDHRVISYLVDEFKKENGIDLSQDRMALQRLKEA 258          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTE (Chaperone protein dnaK OS=Chlorobium tepidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT T ERL+G AAK Q   NP NT+F  KR +GR++ +  V  + KL  + V+  G   K  IG      +K ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK  +   + V +FDLGGGTFD+S+L +  G+FEVK+T GDTHLGG+DFD  ++N+   EFK+++  D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFTKTGERLVGQAAKRQAVTNPKNTIFSIKRFMGRKYDE--VPNEKKLASYDVVNEGGYAKVKIG------DKTYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKKEN---EKVAVFDLGGGTFDISILELGGGVFEVKSTDGDTHLGGDDFDQVIINYLADEFKKQEGIDLRKDAIALQRLKEA 258          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CHLP8 (Chaperone protein dnaK OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaK PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 123/235 (52.34%), Postives = 164/235 (69.79%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT T ERLIG AAK Q   NP NT+F  KR +GR++ +  V  + K   + V+    D        K  EK ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDKK  +   + V +FDLGGGTFD+S+L + +G+FEVK+T GDTHLGG+DFD  ++++   EFK+++  D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFTKTGERLIGQAAKRQAVTNPKNTIFSIKRFMGRKYDE--VPNEKKFASYDVVNEGGD-----ARVKIGEKSYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAAALAYGLDKKKEN---EKVAVFDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQVIIDYLADEFKKQEGIDLRKDAIALQRLKEA 258          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 124/237 (52.32%), Postives = 163/237 (68.78%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPA--DKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T   +RL+G  AK Q  MNP NT +  KR IGRRF + + +     +    + G    D P +G       KQFA EEIS+ VL K++E A  YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V+RIINEPTAA++AYGLDKKA     + +L+FDLGGGTFDVS+L + +G+FEV AT+GDTHLGG+DFD ++V++  + F+ ++  D+  + +AL+RL  A
Sbjct:   34 RTTPSVVAYTKNGDRLVGQIAKRQAVMNPENTFYSVKRFIGRRFDEVTHEATEVSYKVLNVNGNVKLDCPALG-------KQFAPEEISAQVLRKLKEDASKYLGEEVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKA----NETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTHLGGDDFDKKIVDYLAESFRAQEGIDLRKDRQALQRLTEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_PSYCK (Chaperone protein dnaK OS=Psychrobacter cryohalolentis (strain K5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.531e-60
Identity = 124/238 (52.10%), Postives = 162/238 (68.07%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V + D E L+G +AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K+         + +N     K+ A  ++S+ +L KM++ AE YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD+ +++  V EFK+ +  ++ G+  A++RL+ A
Sbjct:   34 RTTPSIVAYKDDEILVGQSAKRQAVTNPNNTLFAIKRLIGRRFDDKVVQKDIGMVPYKIAKADNGDAWVEIN----GKKLAPPQVSAEILKKMKKTAEDYLGEAVTEAVVTVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAAALAYGMDKKQ---GDSTVAVYDLGGGTFDVSIIEIADVDGEQQFEVLATNGDTFLGGEDFDSALIDFLVAEFKKDQDVNLKGDSLAMQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_PSYA2 (Chaperone protein dnaK OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.531e-60
Identity = 124/238 (52.10%), Postives = 162/238 (68.07%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V + D E L+G +AK Q   NP NT+F  KRLIGRRF D  VQ D+ + P+K+         + +N     K+ A  ++S+ +L KM++ AE YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFDVS++ I     E  FEV AT GDT LGGEDFD+ +++  V EFK+ +  ++ G+  A++RL+ A
Sbjct:   34 RTTPSIVAYKDDEILVGQSAKRQAVTNPNNTLFAIKRLIGRRFDDKVVQKDIGMVPYKIAKADNGDAWVEIN----GKKLAPPQVSAEILKKMKKTAEDYLGEAVTEAVVTVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAAALAYGMDKKQ---GDSTVAVYDLGGGTFDVSIIEIADVDGEQQFEVLATNGDTFLGGEDFDSALIDFLVAEFKKDQDVNLKGDSLAMQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.531e-60
Identity = 121/235 (51.49%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V  TD  ERL+G  AK Q   NP  T+F  KRLIGRR+ D +V  D  L P+K++        +    + + K ++  +IS+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK      +  + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EF++++  ++  +  AL+RL+ A
Sbjct:   34 RTTPSIVALTDDDERLVGQPAKRQAVTNPEKTIFAVKRLIGRRYDDPTVAKDKDLVPYKIVKASNGDAWV----EADGKIYSPSQISAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDK----AKQGTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVGYLADEFQKEQGINLRNDKLALQRLKEA 260          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLFF8.974e-6151.71Chaperone protein dnaK OS=Chlamydophila felis (str... [more]
DNAK_LEPBP1.172e-6053.19Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_LEPBA1.172e-6053.19Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_DESMR1.172e-6051.28Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_CHLTE1.172e-6052.97Chaperone protein dnaK OS=Chlorobium tepidum GN=dn... [more]
DNAK_CHLP81.172e-6052.34Chaperone protein dnaK OS=Chlorobaculum parvum (st... [more]
DNAK2_THEEB1.172e-6052.32Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK_PSYCK1.531e-6052.10Chaperone protein dnaK OS=Psychrobacter cryohalole... [more]
DNAK_PSYA21.531e-6052.10Chaperone protein dnaK OS=Psychrobacter arcticus (... [more]
DNAK_OLICO1.531e-6051.49Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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