FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AGRRK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=sucC PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.089e-38 Identity = 96/239 (40.17%), Postives = 133/239 (55.65%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQ L+ +G V G+A+ S DE + A + + VVKSQI AGGRG G FK KGGV + K E+V + MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +A P I+ V ID G+T D+ + D L + A R D + LYK F E D LLE+NPL + +L DAK++FD NA FR + Sbjct: 1 MNIHEYQAKALLKSFGAPVADGVAIFSADEAEAAAKQL--PGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEDVVANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLEGAAREDGAKLFPILYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKVSFDGNALFRHE 237
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_DESOH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=sucC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38 Identity = 97/241 (40.25%), Postives = 140/241 (58.09%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 + IHE+Q EL YGI P+G V + + +A ++ FP +VVK+QI AGGRG G GGV + K +E + LAG MLG LVT QTGP+G +V KV + + +S+ E+Y +++ DR+TAG +I+ GG IE +AE P I+KV ++ G++ + GL + V L+KLF + D +L+EINPL T+ K ++A DAK+NFDD+A FR K L Sbjct: 1 MKIHEFQTKELFRTYGIPTPEGRMVNTAEAAGEAAGELGGFP----VVVKAQIHAGGRGKG-------GGVKLAKSADEAKSLAGAMLGSRLVTPQTGPEGTLVQKVLVEQGVSIAKELYLSVVADRETAGIVIMASEAGGMDIEAVAETTPEKILKVFVNPLAGLSAFHCRQAAYGLNLPAEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSALFRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BACC4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain B4264) GN=sucC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38 Identity = 93/239 (38.91%), Postives = 136/239 (56.90%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG ++ YG++VP G +V+E +A +++ D VVK+QI AGGRG GGV + K +EV A +LG LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A++ + LY+ F E DC++ EINPL T +++A DAKLNFD NA +R K L Sbjct: 1 MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTD--VCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BACC2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain G9842) GN=sucC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38 Identity = 93/239 (38.91%), Postives = 136/239 (56.90%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG ++ YG++VP G +V+E +A +++ D VVK+QI AGGRG GGV + K +EV A +LG LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A++ + LY+ F E DC++ EINPL T +++A DAKLNFD NA +R K L Sbjct: 1 MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTD--VCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNIHIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_STACT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus carnosus (strain TM300) GN=sucC PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38 Identity = 94/239 (39.33%), Postives = 133/239 (55.65%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG E+ G+ VP+G + +E + +++ D VVK+QI AGGRG GGV I K EVE A ++LG+ LVT QTGP+GK V ++Y+ E + E Y ++DR T ++ +GGT IE++A K P I K ID G+ A ++ + N A + + LY +F E DC+++EINPL T ++A DAK+NFDDNA FR K L Sbjct: 1 MNIHEYQGKEIFRSMGVPVPEGRVAFTAEEAVEKAKEL--DTDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEAYANELLGKQLVTHQTGPEGKEVKRLYIEEGADIKKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKSPEKIFKETIDPVVGLAPFQARRIAFNINIPKESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDAKINFDDNALFRHKDIL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BORPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=sucC PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38 Identity = 91/241 (37.76%), Postives = 137/241 (56.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYLLF 748 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + ++V LA ++LG LVT QTGP+G+ V+++Y+ + + E Y +++ DR T II S+GG IE++A P I+ ID G+ E A KV + + + A + +KLY + ++D +L+EINPL S ++A DAK NFD NA FR + + Sbjct: 1 MKIHEYQGKELLKQFGVPVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLARSLDDVRKLASEILGMQLVTHQTGPEGQKVNRLYIEDGADIQKEYYVSLVTDRATQKVAIIASSEGGMDIEEVAHSTPEKIITEYIDPLTGLQAEQAKKVAESIGLSGGSADQAADVFQKLYTCYMDTDASLVEINPLNCDSKGNIIALDAKFNFDSNALFRHPEIVAY 232
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_WOLWR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=sucC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38 Identity = 96/236 (40.68%), Postives = 135/236 (57.20%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ E++ K+ ++VPKG S +EVK + D VVK+QI AGGRG GGV + K EE + M+G LVT QTGP G+ V KVY+ E S+ E Y ++++D K + PI I S+GG IE++A+ P IVK ID T D++K+ L+P+ ++ + K +Y F +D + +EINPL ETS +A DAK+NFDDNA +R Sbjct: 1 MNIHEYQAKEVLHKFNVSVPKGFVATSAEEVKTQVSQLKSD--VFVVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKDMIGMTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAKNSPAKIVKFDID---SATSFDSSKLSSSFHLSPEQIEKITNV--AKNIYDAFIATDASQIEINPLVETSSGDFIALDAKINFDDNALYR 222
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ERYLH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=sucC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38 Identity = 97/240 (40.42%), Postives = 136/240 (56.67%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDE-VKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N+HEYQ EL+AKYGI +P G A +V+E V A Q P + VVK+QI AGGRG G FK KGGV + K E+VE A +MLG LVT QTG +GK V+++Y+ + + + +E Y ++++DR + +I ++GG IE++A P I + ID G V L A + K+LY F + DC +LEINPL ET QL+ D K++ D NA +R K Sbjct: 1 MNLHEYQAKELLAKYGIGIPAGHAALTVEEAVAGAKQLPGPLY---VVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEDVEASAREMLGNTLVTVQTGEEGKQVNRLYVTDGVDIASEYYLSMVVDRASGRVGMIVSTEGGMDIEEVAHSTPEKITTITIDPAQGFMPHHGRAVAFALKLSGDLNKQAQKLAKQLYTAFMDLDCEMLEINPLVETEDGQLLVLDTKMSIDGNALYRHK 237
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_DESAH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=sucC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38 Identity = 97/238 (40.76%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + IHEYQ L +G+ VP G SV+E + + +P +VVK+QI AGGRG G GGV + +EE AG++LG LVT QTGPQG+ V K+ + + E+Y +I++DR TAG +I+ +GG IE +A K P I+KV +D GI +V GL A + +K LY LF ++DC+LLEINPL TS +++A DAK++ D NA FR K Sbjct: 1 MKIHEYQAKALFRTFGVPVPDGGVAFSVEEAVDVARGLGGYP----VVVKAQIHAGGRGKG-------GGVKLAASEEEARRFAGEILGMTLVTHQTGPQGREVKKLLVEAGQKIAKELYLSILVDRATAGIVIMASQEGGMDIETVAAKTPEKIIKVRVDPLTGIQGYYLRQVGFGLGLPKAALKEFSALLKNLYTLFVKNDCSLLEINPLILTSDDRVMALDAKVDIDSNALFRHK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BACWK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus weihenstephanensis (strain KBAB4) GN=sucC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38 Identity = 93/239 (38.91%), Postives = 135/239 (56.49%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +NIHEYQG ++ YG++VP G +V+E +A +++ + VVK+QI AGGRG GGV + K EEV A +LG LVT QTGP+GK V ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P I K ID G+ A ++ + A++ + LY F E DC++ EINPL T +++A DAKLNFD NA +R K L Sbjct: 1 MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTE--VCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |