FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_GRAFK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Gramella forsetii (strain KT0803) GN=sucC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32 Identity = 85/245 (34.69%), Postives = 136/245 (55.51%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-----SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 +NIHEYQG E++ +G+ + +G + E +A +++ V+K+Q+ AGGRG G GGV + K +EVE++AG+++G LVT QT +GK V +V + E + + E Y +++L+R T +I+ ++GG IE +AE+ P +I ID G+ A ++ L + + V LY+ F +SD +L EINP+ +TS ++A DAK+ DDNA FR K Y Sbjct: 1 MNIHEYQGKEILNSFGVRIQRGTVARNAKEAVEAAKELTEKTGTGWHVIKAQVHAGGRGKG-------GGVKLAKNLKEVEEIAGEIIGMNLVTPQTSAEGKKVHQVLVTEDVYYPGDNEPEEYYMSVLLNRATGRNMIMYSTEGGMDIETVAEETPELIFTEEIDPATGLLGFQARRIAFNLGLSGKGFKEMTKFVMSLYEAFEKSDSSLFEINPVLKTSDDLIMAVDAKVTLDDNALFRHKDY 238
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ANADE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=sucC PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 83/234 (35.47%), Postives = 126/234 (53.85%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E++ K+G+ VP+G + E + A + + VK+QI AGGRG G GGV + + +E A MLG +L T QTGP+G+ V KVY+ E + E+Y + LDR+ ++ +GG IE++A K+P+ I++ I G+ A ++ GL + LY + +D +L EINPL T G +++A DAK+NFDDNA +R Sbjct: 1 MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGIS--AVKAQIHAGGRGKG-------GGVKLARSPDEARQHAEAMLGMMLKTPQTGPEGQEVRKVYVEEGCRIARELYLGMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLSGDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_EHRCJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ehrlichia canis (strain Jake) GN=sucC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 84/234 (35.90%), Postives = 124/234 (52.99%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ +++++G++VPKG V S+ EV A + K +VVK+QI AGGRG GGV + + +E + MLG LVT QT G+ V KVYL E + E Y + +++RK + II ++GG IE++A P ++ ID G + + + +K+YK+ +D +EINPL ETS +A DAK+NFDDNA +R Sbjct: 1 MNIHEYQAKHILSRFGVSVPKGAIVHSLSEVDDAISKLHS--KVIVVKAQIHAGGRGKA-------GGVVVCRTSDEAKASIKNMLGSTLVTHQTSKDGQKVRKVYLEEGCDIKKEYYISAIVNRKQSQVSIIFSTEGGVDIEEVASTSPEKVIVCNIDPLFGFQSFHGRNLCFDSNLSLDQTRKISDIAEKIYKVMLSTDANQVEINPLVETSSGNFIALDAKINFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIAD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter sp. (strain ADP1) GN=sucC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 83/235 (35.32%), Postives = 127/235 (54.04%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ KYG++V +G+ S +E A + + K V+K+Q+ AGGRG GGV +VK KEE D A +++G LVT QT G+ V+ V +CE + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ ++A DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKKYGVSVQEGILARSAEEAVAAFEQL--GGKFAVIKAQVHAGGRGKA-------GGVKVVKSKEEAADYANQLIGTNLVTYQTDANGQPVNSVLVCEDVYPVERELYLGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKLMAGAYQAFVENDFALFEINPLSVRENGDILAVDAKIGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_EHRCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ehrlichia chaffeensis (strain Arkansas) GN=sucC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32 Identity = 87/241 (36.10%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKL-------YKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +NIHEYQ +++K+G+NVPKG+ V S+ EV A + + K +VVK+QI AGGRG GGV + + +E + MLG L+T QT G+ V KVYL E ++ E Y + +++RK II ++GG IE++A P ++ I+ G + D N +++Q +K+ YK +D +EINPL ETS + +A DAK+NFDDNA +R Sbjct: 1 MNIHEYQAKHILSKFGVNVPKGVVVHSLGEVDGALSQL--NSKVVVVKAQIHAGGRGKA-------GGVVVSRTLDETKTSIKNMLGSTLITHQTSKDGQKVRKVYLEEGCNIKKEYYISAIVNRKQGQVSIIFSTEGGVDIEEVAATSPEKVIVCNINPVFGFQGFHGRNLC-------FDSNLSLDQTRKISDIAGKIYKAVLSTDANQIEINPLVETSSGEFIALDAKINFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AQUAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus GN=sucC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32 Identity = 90/238 (37.82%), Postives = 133/238 (55.88%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + +HE+Q E+ AKYGI VP+G S+ E K+ +++ FP LVVK+QI GGRG GGV IVK +E+E +LG++L T Q P GK V++V + + ++ E Y AI LDR + P+I+ + GG IE++ ++ P I+ ID G+ A ++ L V + KLY+++ + D +L+EINPL T L+A DAKL+ DDNA FR K Sbjct: 1 MKLHEHQAKEIFAKYGIPVPEGKVAFSLKEAKEVAEELGEFP----LVVKAQIHCGGRGKA-------GGVKIVKDMDELEKAVESLLGKVLKTFQC-PDGKPVNRVLIEKATNIDKEYYLAITLDRSKSKPVIMASAAGGMEIEEIVKENPEAIIIETIDPELGLMPYQARELAFKLNLPV---KEFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRHK 223
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COXBU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii GN=sucC PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 86/236 (36.44%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L+ KY I VP V + D A + D VVK+Q+ AGGRG GGV +VK KEE++ +LG LVT QT +G+ V+++ + + + E+Y ++DR + + + ++GG IE +AEK P I+KV ID G+ ++ GL + + V LY+LF E D +LLEINPL T +L+ DAK+N DD+A +RQ Sbjct: 1 MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDR--WVVKAQVHAGGRGKA-------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COXBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 86/236 (36.44%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L+ KY I VP V + D A + D VVK+Q+ AGGRG GGV +VK KEE++ +LG LVT QT +G+ V+++ + + + E+Y ++DR + + + ++GG IE +AEK P I+KV ID G+ ++ GL + + V LY+LF E D +LLEINPL T +L+ DAK+N DD+A +RQ Sbjct: 1 MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDR--WVVKAQVHAGGRGKA-------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTIDPAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COXB2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain CbuG_Q212) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 85/236 (36.02%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L+ KY I VP V + D A + D VVK+Q+ AGGRG GGV +VK KEE++ +LG LVT QT +G+ V+++ + + + E+Y ++DR + + + ++GG IE +AEK P I+KV +D G+ ++ GL + + V LY+LF E D +LLEINPL T +L+ DAK+N DD+A +RQ Sbjct: 1 MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDR--WVVKAQVHAGGRGKA-------GGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQPVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMHC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 89/236 (37.71%), Postives = 129/236 (54.66%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHEYQ EL ++GINV G S DE + + + VK+QI AGGRGLG GGV I K +EV+ A ++LG LVTKQTGP+GK+V K+Y+ + ++ E Y ++ +R +I + GG IE++ + N+I + ID G+ A +V D L N + + LYKL+ +D L+EINP+ T+ + A DAK+ FDD A FR + Sbjct: 1 MNIHEYQAKELCREFGINVSNGALALSADEAVEVAKKL--GGNVWAVKAQIHAGGRGLG-------GGVKIAKNLDEVKKYANQILGMTLVTKQTGPKGKLVRKIYIEQGCNIKKEFYVSLTFNRAKEQIGLIASASGGMGIEEVDK---NLIKTLNIDPQIGLKAFHAYEVGDFLGFDKDLNNKFYKFLNGLYKLYIATDANLVEINPMVLTAEDEFFALDAKMGFDDAALFRHE 224 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |