FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRATN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. novicida (strain U112) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRAT1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=sucC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30 Identity = 81/240 (33.75%), Postives = 128/240 (53.33%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G+ LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGKNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNSPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBCM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain M66-2) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V+ A K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V+ A K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBC3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 88/241 (36.51%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V+ A K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_TERTT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 90/239 (37.66%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQG +L A+YG+ V KG+A + E A + D VVK+Q+ AGGRG GGV +VK K E+E+ A + LG+ LVT QT G+ VS++ + + E+Y ++DR T + + ++GG IE +AE+ P I+K ID G A LA K+ I+Q +++ K+F E D LLEINPL T L DAK+N D NA +RQ Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGVAAETPAEAASAAGILGGD--TWVVKAQVHAGGRGKA-------GGVKLVKSKAEIEEFAKQWLGKNLVTYQTDENGQPVSRILVETCTDIDQELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPEKILKAIIDPLAGAQPYQAR----DLAFKLGLEGKQIKQFTQIFLGLAKMFKEKDLALLEINPLVITKEGDLHCLDAKINIDGNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEMY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas mendocina (strain ymp) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 85/241 (35.27%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + +E +A + + E VVK+Q+ AGGRG GGV +VK KE+ + A LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A + P I+K ID G + LA ++ D ++Q ++ KLF + D LLE+NPL + L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACEKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAANWLGKRLVTYQTDANGQPVSKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHETPEKILKATIDPLVGAQPYQGRE----LAFQLGLEGDQVKQFTHIFVGLAKLFQDYDLALLEVNPLVIKADGNLHCLDAKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MANSM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mannheimia succiniciproducens (strain MBEL55E) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 86/239 (35.98%), Postives = 134/239 (56.07%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ ++ A+YG+ V +G A S++E +A + + + V K Q+ AGGRG GGV +VK +EEV K LGQ LVT QT +G+ V+ +Y+ ++ E+Y +LDR + + + ++GG +IE++AEK P+++ K+PID G + LA K+ + I+Q +++ K+F E D +LLEINPL QL DAK+ D NA +RQ Sbjct: 1 MNLHEYQAKQIFAQYGLPVSEGCACQSLEEAIQAVKKL--GGGQWVAKCQVHAGGRGKA-------GGVKLVKSEEEVRSFFEKFLGQRLVTFQTDAKGQPVNAIYMEACANVKKELYLGAVLDRSSQRIVFMVSTEGGVNIEEVAEKTPHLLHKMPIDPLVGAMPYQGRE----LAFKLGLQGKQIQQFAQIFCQLGKMFVEKDLSLLEINPLVILDNDQLHCLDAKIVVDGNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_LEGPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella pneumophila (strain Paris) GN=sucC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30 Identity = 85/241 (35.27%), Postives = 128/241 (53.11%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A YG+ VP+G +V++ + VVK+Q+ AGGRG GGV +V K+E+ +A MLG LVT QT +G+ V+ + + E + E+Y ++DR T +I+ ++GG IE +A + P I KV +D G+ + A K+ ++D I+Q L K+F + D +LLEINPL T QL+ D K+N D NA FRQ + Sbjct: 1 MNLHEYQAKQLFASYGLPVPRGEVAYNVEDALLVASQL--STSRWVVKAQVHAGGRGKA-------GGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAILVEETCEIDKELYLGAVVDRATRRVVIMASTEGGVEIEKVAHETPEKIFKVVVDPLVGVMPFQCRET----AFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 87/241 (36.10%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPK 228 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |