FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAES2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus somnus (strain 2336) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 85/238 (35.71%), Postives = 127/238 (53.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ +L A YG+ V KG +V++ A + + + + K QI AGGRG GGV +VK +EV K LGQ LVT QT QG+ + ++YL + E+Y + ++DR + + + S+GG IE++AEK P+++ +V ID G + LA K+ I+Q +++ KLF E D +LLEINPL +L DAK+ DDNA +R Sbjct: 1 MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKL--SGSQWIAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRE----LAFKLGLSGKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAES1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus somnus (strain 129Pt) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 85/238 (35.71%), Postives = 127/238 (53.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ +L A YG+ V KG +V++ A + + + + K QI AGGRG GGV +VK +EV K LGQ LVT QT QG+ + ++YL + E+Y + ++DR + + + S+GG IE++AEK P+++ +V ID G + LA K+ I+Q +++ KLF E D +LLEINPL +L DAK+ DDNA +R Sbjct: 1 MNLHEYQSKKLFADYGLPVTKGYVCENVEQALSAIEKL--SGSQWIAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRE----LAFKLGLSGKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_FRAP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=sucC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 81/240 (33.75%), Postives = 127/240 (52.92%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L+ YG+ V KG+ + +E +A + K VVK+Q+ AGGRG GGV +VK +E ++A ++G LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + L Sbjct: 1 MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQL--GGKFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL 231
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus (strain YJ016) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 86/241 (35.68%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ +P+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPIPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain MJ11) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 87/241 (36.10%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYLGAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_VIBF1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 87/241 (36.10%), Postives = 130/241 (53.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A++G+ VP+G A + E +A + K VVK Q+ AGGRG GGV + KE V++ A K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKK--VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYLGAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SACD2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 85/235 (36.17%), Postives = 122/235 (51.91%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQG +L A+YG+ V KG+A + E A + D + VVK+Q+ AGGRG GGV +V K E+E+ A K LG L+T QT G+ VS++ + + +E+Y ++DR T I + ++GG IE +AE+ P I+K ID G A ++ L + L K+F + D LLEINPL T L DAK+ D NA +RQ Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGIAAETPAEAAAAADIIGGD--KWVVKAQVHAGGRGKA-------GGVKLVSSKAEIEEFAKKWLGNNLITYQTDENGQPVSRILVESCTDIADELYLGAVVDRSTRRVIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQARELGFKLGLNPVQIKQFTQIFLGLAKMFVDKDLALLEINPLVITDEGNLHCLDAKVAIDGNAMYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 87/241 (36.10%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + +E +A + E VVK+Q+ AGGRG GGV +VK KE+ + A + LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+KV ID G + LA ++ + D I+Q ++ KLF + D LLE+NPL L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKI--GGSEWVVKAQVHAGGRGKA-------GGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVESCTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKVTIDPLVGAQPYQGRE----LAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNPLVIKKDGNLHCLDAKINIDSNALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA6 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=sucC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.175e-30 Identity = 85/237 (35.86%), Postives = 122/237 (51.48%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V +G A + +A + E VVK Q+ AGGRG GGV +VK K+E++ A K LGQ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +AE+ P I+K ID G A ++ L K + L KLF E D L+E+NPL L DAK+ D NAA+RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSEGYAAETPQAAVEAADRI--GGTEWVVKCQVHAGGRGKA-------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYLGAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLKGVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ALHEH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=sucC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.175e-30 Identity = 80/231 (34.63%), Postives = 122/231 (52.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNA 718 +N+HE+Q L A Y I +P+G S E +A + VVK+Q+ AGGRG GGV ++K KEEVE+ +LG LVT QT +G+ + V + + L + E+Y ++DR + +G + GG IE++A P I+ + +D G K+ L + ++ +K LY++F E D +++EINPL T QL+A DAK+N DDNA Sbjct: 1 MNLHEFQAKHLFADYDIPIPQGYVARSSGEAVEAAGRL--GGSVWVVKAQVHAGGRGKA-------GGVKVLKTKEEVEEFTDSLLGSRLVTHQTDAKGQPIHAVLVEQGLDIARELYLGALVDRASKRVTFMGSAAGGMDIEEVAASTPEKILTLAVDPAAGFQAYQGRKMAFALGLEGKQIGQLVKIMKSLYRIFEEKDLSMIEINPLIVTGDGQLLALDAKVNVDDNA 222 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |