FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSE14 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sucC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 84/243 (34.57%), Postives = 127/243 (52.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + + +A + E VVK+Q+ AGGRG GGV +V+ KE+ A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G A+ G LA ++ + Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKI--GGTEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTHIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVG------AQPFQGRDLAFQLGLEGKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain SDF) GN=sucC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.515e-27 Identity = 76/235 (32.34%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++ LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIRTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PECCP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sucC PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 84/239 (35.15%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT QG+ V ++ + + E+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + Q K++ LF E D L+EINPL T LV D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRE----LAFKLGLSGKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLVCLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ERWT9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sucC PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 82/239 (34.31%), Postives = 121/239 (50.63%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V+++ + + E+Y ++DR T + + ++GG IE +AE+ P++I K+ +D G + LA K+ + Q K++ LF E D L+EINPL T LV D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIDKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ERWCT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Erwinia carotovora subsp. atroseptica GN=sucC PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 83/239 (34.73%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT QG+ V ++ + + E+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + Q K++ LF E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVSNKEDIRAFAENWLGKKLVTYQTDAQGQPVHQILVEAATDIDKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQPYQGRE----LAFKLGLSGKQVAQFTKIFMGLATLFLERDLALVEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BAUCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=sucC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 82/242 (33.88%), Postives = 128/242 (52.89%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNG---ITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 + +HEYQ L A+YGI +PKGL + +E K++ + + +VK Q+ AGGRG GGV IV+ KEE+++ A + G+ L+T+QT G+ VSK+ + + + E+Y ++DR I +GG IE++A++ P+++ ++ +D G D A + GL+ K I Q K++ LF E D + EINPL T L+ D KL+ D NA FRQ Sbjct: 1 MKLHEYQAKMLFAQYGIPIPKGLVCTTPNEAKESIAVI--GYGPWIVKCQVHAGGRGKS-------GGVRIVRSKEEIQEFAKQWFGKHLITEQTNHIGQPVSKILVEAAIDIAQELYLGCLVDRSNQCIKFIASIQGGIDIENIAKEKPHLLHQIILDPLIGPQLYQSRDLAFKI-GLSSK-----KQINQFNKIFMGLATLFLEKDLVMAEINPLVITRLGDLICLDGKLHVDSNALFRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BACTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides thetaiotaomicron GN=sucC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 79/238 (33.19%), Postives = 124/238 (52.10%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGL----AVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E+ +KYGI V + A +V K+ D +V+K+Q+L GGRG GGV +V E+ A +LG + +G V+++ + E + + E Y + +DR T I++ + GG IE++A + P I++ ID F G+ D A + L P + ++ LYK+F E+D +L+E+NPLA T+ L+A DAK+ FDDNA +R Sbjct: 1 MKIHEYQAKEIFSKYGIPVERHTLCRTAAGAVAAYKRMGSD------RVVIKAQVLTGGRGKA-------GGVKLVDNTEDTYQEAKNILGMSI-------KGLPVNQILVSEAVDIAAEYYVSFTIDRNTRSVILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPHIEQAGRMAAILQALYKIFMENDASLVEVNPLALTAKGILMAIDAKIVFDDNALYR 218
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AERHH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sucC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 81/241 (33.61%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ V +G A A+ E +A + VVK Q+ AGGRG GGV + K K+E+ A LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A + P +I K +D G A + LA K+ + I+Q K++ ++F + D LLEINPL T+ L D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEYGLPVSEGYACATPQEAAEAADKI--GGNTWVVKCQVHAGGRGKA-------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRGSRRVVFMASTEGGVEIEKVAHETPELIHKAALDPLVGPQPYQARE----LAFKLGLVGEQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHIDS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=sucC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 79/239 (33.05%), Postives = 121/239 (50.63%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWGVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEPW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sucC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + D VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L K+F + D LLEINPL T + D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGHIGGDM--WVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAENWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATQRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLTPTQMKQFTKVFMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALFRQPK 228 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |