FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pestis (strain Pestoides F) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pestis bv. Antiqua (strain Angola) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pestis GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_YERP3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 79/239 (33.05%), Postives = 120/239 (50.21%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ +D G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKLVNSKEDIRAFAEQWLGKKLVTYQTDANGQPVHQILVEAATDIDKELYLGAVIDRSSRRVVFMASTEGGVEIEKVAEETPELIHKIALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HALMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haloarcula marismortui GN=sucC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 83/238 (34.87%), Postives = 129/238 (54.20%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 + +HEYQ ++ A GI P +VDE A +++ +P + +K+Q+ GGRG GG+ +V+ KEE + A ++G L +G VSKV + E + VNE+Y + +DR P+ + +KGG +IE++AE+ P+ I + ID G+ A KVV G+ +VA ND + LY+L+ + D EINPL TS +++AADA +N D +A FRQ Sbjct: 1 MRLHEYQAKQVFADAGIPTPASQLAETVDEAVDAAEEIGYP----VAIKAQVHVGGRGKA-------GGIKLVESKEEAREAAEDIIGMDL-------KGYHVSKVLVEEAVDFVNELYVGVTMDRGEGRPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKVVYEAGVDREVA--NDVASVLTTLYQLWDDRDGADTEINPLMITSDDEVIAADAVMNVDGDALFRQ 218
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_BEUC1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=sucC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 75/241 (31.12%), Postives = 126/241 (52.28%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVV-KSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 +++ EYQ ++ K+G+ V G+ +VDE + A + + +VV K+Q+ GGRG GGV + + EE + A ++LG + +G V +V + E S+ E YF+++LDR + + +GG IE LA + P + +V +D GI AA++V G A VA + ++KL+ ++ D TL+E+NPL T+ +++A D K+ DDNA FR + Sbjct: 1 MDLFEYQARDVFEKHGVPVLGGIVATTVDEARAAAETLTSGAGSVVVVKAQVKTGGRGKA-------GGVKLARSPEEAAEAAEQILGMDI-------KGHTVHRVMIAEGASIAEEYYFSVLLDRANRSYLAMASVEGGVEIEQLAVERPEALARVAVDPLVGIDAAKAAEIVAAAGFADDVA--GAVADVIQKLWTVYDAEDATLVEVNPLVRTTDGRVIALDGKVTLDDNAEFRHPEH 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC2_STRCO (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Streptomyces coelicolor GN=sucC2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 74/240 (30.83%), Postives = 123/240 (51.25%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 ++++E+Q EL ++GI VP+ S + ++ + + VVK+Q+ GGRG GGV + E E+ A +LG + +G V V L E + E Y + +LDR + G + I ++GGT IE++A + P + ++P+D G+ A ++ D GL P+ D + +L+K+ D L+E+NPL T+ ++VA D K+ DDNA FRQ R+ Sbjct: 1 MDLYEHQARELFKEHGIVVPRAEVTDSPERAREIARAL---GGRAVVKAQVKTGGRGKA-------GGVRLAADPAEAEEAARHILGMDI-------RGHTVDTVMLAEPCEIEREFYVSYVLDRASGGFLAIASAEGGTEIEEVAARRPEAVARIPVDPATGVHTATAVRIADAAGLPPQTVD------TLVRLWKVLVREDALLVEVNPLVRTAEGRIVALDGKVTLDDNARFRQSRW 217 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |