FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHESW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain W3-18-1) GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEPC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHELP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 80/237 (33.76%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + D VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ + D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGHIGGDM--WVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIETVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKVFMGLATMFTDHDFALLEINPLVITTEGNIHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PROAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Propionibacterium acnes GN=sucC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 70/235 (29.79%), Postives = 126/235 (53.62%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 ++++EYQ +L K+G+ V +G+ + ++ +A + + VK+Q+ GGRG GGV I K E + A +LG + +G V KV + E + E YF+I+LDR + + +GG IE LA++ P + KVP+D +G+ D A +++ ++++ + V KL++ + + D TL+E+NP+ +T +++A D K+ D+NA+FRQ Sbjct: 1 MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAAAKL--GTPVVAVKAQVKVGGRGKA-------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQ 219
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Archaeoglobus fulgidus GN=sucC2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 76/235 (32.34%), Postives = 125/235 (53.19%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 + +HEYQ ++ +K+GI V +G SV++V+ +++ ++V+KSQ+L GGRG G+K + EE + A +M G +L +G IV K+Y+ E + + EMY + +DR G I S GG IE++A K+P I ++ ++ G+ D +++ + +K LY++ + L+EINPL T LVAADA+LN DD+A FR + Sbjct: 1 MRLHEYQAKQIFSKHGIRVARGELATSVEDVRGIAEEL---GGKVVLKSQVLVGGRGKA---GGIKKAYSV---EEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYAGLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWDYQIRELLLNSQMPREYWKEVASILKTLYRIMVHYEAELVEINPLVVTP-DGLVAADARLNIDDSALFRHR 218
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHESR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain MR-7) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHESM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain MR-4) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHESA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella sp. (strain ANA-3) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQAK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEAM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A K LG+ LVT QT G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L ++F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGRI--GGNMWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEKWLGKNLVTYQTDENGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPIAGPQPFQARDLGFKLGLNPTQMKQFTKIFMGLAQMFLDHDFALLEINPLVITTEGNLHCLDGKIGVDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_KOCRD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 71/238 (29.83%), Postives = 124/238 (52.10%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 +++ EYQ +L K+G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K EE + A ++LG + +G V +V + + + E YF+++LDR + + +GG IE LA + P+ + +V + +GIT+ A ++V+ I + KL +++ + D TL+E+NPL +T +++A D K++ DDNAAFR + Sbjct: 1 MDLFEYQARDLFEKHGVPVLAGIVATTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTPEEAYEYAQQILGMDI-------KGHTVHRVMIAQGADIAEEYYFSVLLDRANRSYLAMCSVEGGMEIEQLAVERPDALARVDVSPADGITEAKAREIVEQAKFDAETAEKVIPVLVKLGEVYAKEDATLVEVNPLVKTGDGEILALDGKVSLDDNAAFRHPEH 221 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |