FC875594

Overview
NameFC875594
Unique NameFC875594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:5..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.129e-43
Identity = 88/147 (59.86%), Postives = 102/147 (69.39%), Query Frame = 2
Query:  131 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 571
            +S      G  +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDH              WKGET +EYWWC E+ L +G   GP++I+DDGGD T  +HE
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMILDDGGDLTAYVHE 146          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.129e-43
Identity = 88/147 (59.86%), Postives = 102/147 (69.39%), Query Frame = 2
Query:  131 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 571
            +S      G  +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDH              WKGET +EYWWC E+ L +G   GP++I+DDGGD T  +HE
Sbjct:    1 MSATTQEKGLNYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGVPVFAWKGETEEEYWWCIEQTLFFG-DKGPNMILDDGGDLTAYVHE 146          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43
Identity = 86/156 (55.13%), Postives = 107/156 (68.59%), Query Frame = 2
Query:  122 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 589
            A A +  +    +++ + D+  ADFGR E+ +AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I+DDGGDAT L+  G KAE+
Sbjct:    3 ATAAATAELQVAKDYVIADIGLADFGRKELNIAETEMPGLMALRAKYGKDKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAMAAGGIPVFAVKGETLEEYWDYTHSILEWGDGGTPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 2
Query:  158 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 589
            +++ V D+  A +GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGDATLL+H G +AE+
Sbjct:    9 QDYIVADIGLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFDWADGGTPNMILDDGGDATLLLHLGARAEK 152          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.631e-43
Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 670
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_XYLF2 (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M23) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.631e-43
Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 670
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.742e-43
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  158 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAE 643
            +++ + DLS AD+GR EI +AE EMP LMA R E+  +QP KGA++TGSLHMTIQTAVL+ETL ALGAEVRW SCNIFSTQDH               KGE+L+EYW  T +  D+GP G    GP++I+DDGGDATLL+H G +AE   +    L +P S +  E
Sbjct:   10 QDYAIADLSLADWGRKEIRIAESEMPALMAIREEYAKTQPLKGARVTGSLHMTIQTAVLVETLQALGAEVRWASCNIFSTQDHAAAALVQAGTPVFAHKGESLKEYWDFTHRIFDFGPAGSDHEGPNMILDDGGDATLLMHLGKRAE---KDASVLANPQSEEERE 172          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.194e-43
Identity = 90/180 (50.00%), Postives = 118/180 (65.56%), Query Frame = 2
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 670
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.194e-43
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 2
Query:  155 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 589
            G +  + D++ ADFGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I+DDGGDAT L+  G KAE+
Sbjct:   14 GVDCVIADINLADFGRKELDIAETEMPGLMALREKYGSEKPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAAKGIPVFAVKGETLEEYWDYTHSILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC875594 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.194e-43
Identity = 88/147 (59.86%), Postives = 102/147 (69.39%), Query Frame = 2
Query:  131 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE 571
            +SV        +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDH              WKGET +EYWWC E+ + +G   GP++I+DDGGD T  IHE
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMILDDGGDLTAYIHE 146          
The following BLAST results are available for this feature:
BLAST of FC875594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_LEPBL2.129e-4359.86Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ2.129e-4359.86Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_SYNS32.780e-4355.13Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RALME2.780e-4359.03Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_XYLFT3.631e-4350.00Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_XYLF23.631e-4350.00Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_MYXXD4.742e-4354.22Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_XYLFM6.194e-4350.00Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_SYNSC6.194e-4358.62Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_LEPIN6.194e-4359.86Adenosylhomocysteinase OS=Leptospira interrogans G... [more]

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Properties
Property NameValue
Genbank descriptionC31405F08EF CTVClemen1 Citrus clementina cDNA clone C31405F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875594 ID=FC875594; Name=FC875594; organism=Citrus clementina; type=EST; length=688bp
GCTCACCCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTTGG
TTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTTAG
ATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCCGC
TAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGGCC
GCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTTGC
CGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACCGG
TTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCACCG
CTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCCAA
GACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCCTG
GAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCTGG
ACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTGAC
GCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAGAA
GACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCAGA
TTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGAT
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