FC876172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 61/122 (50.00%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K GINGFGRIGR+ NDPFID +YM YMFKYDSTHG FKGT+ D L +NGK I V+++RDP IP G G +Y+VES+GVF GGAK IS+ S Sbjct: 4 KAGINGFGRIGRIVLRASLLNPEVEVVAINDPFIDLEYMVYMFKYDSTHGRFKGTVE-AKDGKLVVNGKPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPS 123
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 61/121 (50.41%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG +++ +D L ++G+ I VF PAEIPWGD G YVVES+GVF GGAK +S+ S Sbjct: 6 VGINGFGRIGRLVLRACLQKGIKVTAI-NDPFIDLQYMVYMFKYDSTHGRYKGEVHM-EDGKLIVDGQAISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPS 124
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 59/123 (47.97%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-INVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 KVGINGFGRIGRL NDPFI +YM YMFKYDSTHG +K T + + + L G + V++ RDP+EIPWG +G D+VVES+GVF GGAK IS+ S Sbjct: 8 KVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.245e-23 Identity = 60/123 (48.78%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 K+GINGFGRIGRL NDPFI +YM YMFKYDS HG +K + DD TL K + VF R+P EIPWG+ G DYVVES+GVF GGAK IS+ S Sbjct: 5 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.626e-23 Identity = 59/123 (47.97%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 +K+GINGFGRIGRL NDPFI +YM YMFKYDSTHGVFKG + ++D L ++GK I VF++ P IPW G +Y+VES+GVF GGAK IS+ S Sbjct: 1 SKIGINGFGRIGRLVLRAALSCGAQVVAV-NDPFIALEYMVYMFKYDSTHGVFKGEVK-MEDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPS 121
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAK 708 KVGINGFGRIGR ND DAK++A++ KYDS HG+FKG++ DDS + ++GK IKVF+++DP++IPWGD GVD V+E++GVF GGAK Sbjct: 4 KVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIV-VDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAK 115
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 59/128 (46.09%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 352 SDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFK-GTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 +D K+GINGFGRIGRL NDPFI +YM YMFKYDS HG +K + V D+ TL K + VF R+P +IPWG+ G D+VVES+GVF GGAK IS+ S Sbjct: 2 ADKKIKIGINGFGRIGRLVARVILQRNDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 129
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.583e-23 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 367 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVF 663 KVGINGFGRIGRL NDPFID +YM YM K DSTHG F G ++ ++ L++NGKLI V +RDPA IPW G +YVVES+GVF Sbjct: 5 KVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFPGEVST-ENGKLKVNGKLISVHCERDPANIPWDKDGAEYVVESTGVF 102 HSP 2 Score: 21.1718 bits (43), Expect = 2.583e-23 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 704 QKVGISAPSADA 739 +KV ISAPSADA Sbjct: 118 KKVIISAPSADA 129
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23 Identity = 58/121 (47.93%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 370 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 VGINGFGRIGRL NDPFI +Y AYMFKYDSTH +KG ++ + + I+GK I VF +RDP IPWG GVDYV+ES+GVF GAK I++ S Sbjct: 5 VGINGFGRIGRLVLRVALSRADIKVVAINDPFIAPEYAAYMFKYDSTHKAYKGEVSA-SGNKINIDGKEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPS 124
BLAST of FC876172 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 364 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFXXXXXXXXXXXGGAKGGYISSIS 732 +K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG + +D L ++GK I VF++ P IPW G +Y+VES+GVF GGAK IS+ S Sbjct: 1 SKIGINGFGRIGRLVLRAALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKA-EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121 The following BLAST results are available for this feature:
BLAST of FC876172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876172 ID=FC876172; Name=FC876172; organism=Citrus clementina; type=EST; length=740bpback to top |