FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ENT38 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Enterobacter sp. (strain 638) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 90/161 (55.90%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  ++ A+EL+PGGVNSPVRAF  VGG P+  +   G+ ++D+DG  YIDYVGSWGP ++GH    +  A+ E  ++G SFGAP  +E  +AE+V   VP+++MVR VNSGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIERADGAFLYDVDGKAYIDYVGSWGPMVLGHNHPTIRNAVIEAAQRGLSFGAPTEMEVKMAELVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_BURP0 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkholderia pseudomallei (strain 1106a) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49
Identity = 93/161 (57.76%), Postives = 112/161 (69.57%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            + N++  F  A+ ++PGGVNSPVRAF+SVGG P      +G++ WD DG  YIDY+GSWGP I+GH    VLAA+   +  G SFGAP   E  +AE +   VPSIE VR V+SGTEA M  LRLAR FTGR RI +FEGCYHGHAD  LVKAGSG+ T G
Sbjct:    1 MSNNQTLFERAQRIIPGGVNSPVRAFRSVGGTPRFVARAQGAYFWDADGKRYIDYIGSWGPMIVGHVHPDVLAAVQRVLADGFSFGAPTEAEIEIAEEICKLVPSIEQVRMVSSGTEATMSALRLARGFTGRSRIVKFEGCYHGHADSLLVKAGSGLLTFG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PELTS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 95/160 (59.38%), Postives = 118/160 (73.75%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK-GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S   +  A +++PGGVNSPVRAFK+VG  P+     +G+ ++D D NEYIDYV SWGP I+GH   +V+ AL   + + GTSFGAP  LEN+LAEM++ AVPSIEMVR VNSGTEA M  LRLAR +TGR +I +FEGCYHGHAD  L+KAGSG  T G+
Sbjct:    8 SVSLYRQACKVIPGGVNSPVRAFKAVGLNPVFVKKGEGARIYDFDDNEYIDYVCSWGPLILGHRHPRVVGALERCLNEVGTSFGAPTELENILAEMIVEAVPSIEMVRLVNSGTEAAMSALRLARGYTGRNKIVKFEGCYHGHADFLLIKAGSGALTFGV 167          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_NATTJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 94/160 (58.75%), Postives = 115/160 (71.88%), Query Frame = 2
Query:  218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            NS++ F  A +LMPGGVNSP RAF SV   P+      GS ++D+D NEYIDYV S+GP I+GH   Q+  AL E +  GT +G+P  LEN +AE+VI AVPSIEMVR VNSGTEA M  LRLAR +TG+ +I +  GCYHGH+D  L+KAGSGV TLGL
Sbjct:    5 NSQKYFKTACDLMPGGVNSPARAFSSVESDPLFIKDGSGSKVYDVDDNEYIDYVASYGPLILGHCHPQIRDALKEQIDYGTGYGSPTELENEMAELVIEAVPSIEMVRMVNSGTEATMSALRLARGYTGKNKIVKLTGCYHGHSDSLLIKAGSGVTTLGL 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIBY (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain AYE) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIBT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=hemL PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIBS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain SDF) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIBC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain ACICU) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIB5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain AB0057) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIB3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinetobacter baumannii (strain AB307-0294) GN=hemL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 86/157 (54.78%), Postives = 114/157 (72.61%), Query Frame = 2
Query:  224 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            E+ F  A + +PGGVNSPVRAF  VGG P+  +  KG+++WD+DG  Y+DYVGSWGP I+GHA   ++ A+    + G SFGAP + E  LA+++   +PSIE+VR  NSGTEA M  +RLAR +TGR++I +FEGCYHGH+D  LVKAGSG+ T G
Sbjct:    8 EQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVGSWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTEATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKG 164          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ENT383.479e-4955.90Glutamate-1-semialdehyde 2,1-aminomutase OS=Entero... [more]
GSA_BURP03.479e-4957.76Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkho... [more]
GSA_PELTS4.543e-4959.38Glutamate-1-semialdehyde 2,1-aminomutase OS=Peloto... [more]
GSA_NATTJ4.543e-4958.75Glutamate-1-semialdehyde 2,1-aminomutase OS=Natran... [more]
GSA_ACIBY4.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]
GSA_ACIBT4.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]
GSA_ACIBS4.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]
GSA_ACIBC4.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]
GSA_ACIB54.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]
GSA_ACIB34.543e-4954.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Acinet... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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