FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEA8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas aeruginosa (strain LESB58) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.846e-48
Identity = 91/162 (56.17%), Postives = 117/162 (72.22%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  FN A++ +PGGVNSPVRAFKSVGG P+ F   +G+++ D D   Y+DYVGSWGP I+GH+   VL A+   +  G S+GAP  LE  +A++V S VPS+EMVR V+SGTEA M  +RLAR +TGR+ I +FEGCYHGH+D  LVKAGSG  T G+
Sbjct:    1 MSRSETLFNNAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVLDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRRQLDHGLSYGAPTALEVEMADLVCSMVPSMEMVRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTFGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_CLONN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Clostridium novyi (strain NT) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.846e-48
Identity = 87/159 (54.72%), Postives = 118/159 (74.21%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            SE  F  A + +PGGVNSPVRAF SVG  PI  D  KGS ++D+DGNEYIDY+ SWGP I+GH+++++   + ET+++GTS+G P  +E  +A+++  A PS++MVR VNSGTEA M  LR+AR +T R +I +FEGCYHGH+D  LVK+GSG  T G+
Sbjct:    9 SEAMFKEAVKYIPGGVNSPVRAFGSVGLNPIFIDRAKGSKIYDVDGNEYIDYICSWGPLILGHSNEKLYEGIEETLRRGTSYGVPTEIEVKMAKLITEAYPSVDMVRMVNSGTEATMSALRVARGYTRRNKILKFEGCYHGHSDALLVKSGSGTITFGV 167          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEPW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas putida (strain W619) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 90/162 (55.56%), Postives = 118/162 (72.84%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F   +G+++ D D   Y+DYVGSWGP I+GH   QVL A+   ++ G S+GAP  +E  +A++V S VPS+EMVR V+SGTEA M  +RLAR +TGR+ I +FEGCYHGH+D  LVKAGSG+ T G+
Sbjct:    1 MSRSESLFAQAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVVDEDDKRYVDYVGSWGPMILGHGHPQVLDAVRNQLQHGLSYGAPTAMETEMADLVCSLVPSMEMVRMVSSGTEATMSAIRLARGYTGRDAIIKFEGCYHGHSDSLLVKAGSGLLTQGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSE14 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 90/162 (55.56%), Postives = 118/162 (72.84%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F    G+++ D D   Y+DYVGSWGP I+GH+  +VL A+   ++ G S+GAP  +E  +A++V + VPS+EMVR V+SGTEA M  +RLAR FTGR+ I +FEGCYHGH+D  LVKAGSG  TLG+
Sbjct:    1 MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAAGAYVTDEDDKRYVDYVGSWGPMILGHSHPEVLDAVRSQLEHGLSYGAPTAMETEMADLVCALVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_NITOC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 89/160 (55.62%), Postives = 117/160 (73.12%), Query Frame = 2
Query:  218 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +S+  F  A+  +PGGVNSPVRAFK VGG+P+ F   +G++++D+D N YIDYV SWGP I+GH   +V+AA+ E   +G  FGAP   E  +AE +   VPS+++VR V+SGTEA M  +RLAR FTGR++I +FEGCYHGHAD  LVKAGSG  TLG+
Sbjct:    5 HSDNLFRRAQAHIPGGVNSPVRAFKGVGGEPVFFVRGEGAYLYDVDDNRYIDYVNSWGPLIVGHTHPEVVAAVQEAAAQGLGFGAPTATEIEMAETLCRLVPSMDLVRMVSSGTEATMSAIRLARGFTGRDKILKFEGCYHGHADSLLVKAGSGALTLGV 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_IDILO (Glutamate-1-semialdehyde 2,1-aminomutase OS=Idiomarina loihiensis GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 94/162 (58.02%), Postives = 114/162 (70.37%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SEE +  A+  +PGGVNSPVRAF  VGG PI F+S +G++M D DG  YIDYVGSWGP I+GH    VL A  +  K+G SFG P  +E  +AE +   VPSIE VR VNSGTEA M  +RLAR +TGR++I +FEG YHGHAD  LVKAGSG  TLG+
Sbjct:    1 MSRSEELYTKAQISIPGGVNSPVRAFNGVGGSPIFFESAEGAYMIDADGKRYIDYVGSWGPMILGHNHPAVLEATLQAAKRGLSFGTPTEVEITMAETIRKIVPSIEKVRMVNSGTEATMTAIRLARGYTGRDKILKFEGNYHGHADSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_HAES2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Haemophilus somnus (strain 2336) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 90/161 (55.90%), Postives = 117/161 (72.67%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S   F  A++++PGGVNSPVRAFK VGG P+  +   G++++DI+G +YIDYVGSWGP I+GH    +L+A+ +  + G SFG P  LE  LAE++   VPSIEMVR VNSGTEA M  +RLAR +T R++I +FEGCYHGH+D  LVKAGSG  TLG
Sbjct:    1 MTTSATLFYRAQQVIPGGVNSPVRAFKGVGGTPVFIEKANGAYIFDIEGKQYIDYVGSWGPMILGHNHPSILSAVLKIAENGLSFGTPTPLEIELAELICQLVPSIEMVRMVNSGTEATMSAIRLARGYTKRDKILKFEGCYHGHSDSLLVKAGSGSLTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ALTMD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=hemL PE=3 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 91/162 (56.17%), Postives = 114/162 (70.37%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            ++ SE  F  A++ +PGGVNSPVRAFK+VGG P       G++MWD DG +YIDY+ SWGP I+GH +  +  A+ E    G SFGAP   E ++AE+V   VPS+EMVR VNSGTEA M  +RLAR +T R +I +FEGCYHGHAD  LVKAGSG  TLG+
Sbjct:    1 MQKSEALFTRAQKTIPGGVNSPVRAFKAVGGTPRFITKADGAYMWDADGKQYIDYIQSWGPMILGHNNAPIREAVIEASCSGLSFGAPTEAEVIMAELVSEMVPSMEMVRMVNSGTEATMSAIRLARGYTSRNKIVKFEGCYHGHADSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIBL (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidobacteria bacterium (strain Ellin345) GN=hemL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 95/162 (58.64%), Postives = 120/162 (74.07%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            L  S E    A+ L+PGGVNSPVRAF++VGG+P +    +G+ ++D DGN YIDYV SWGP I+GHA   V+ A+ +  +KGTSFGA    E  LAE V+ A+P+IE +RFV+SGTEA M  +RLAR FTGR+ I +FEGCYHGH+D  LVKAGSGVATLG+
Sbjct:    5 LDRSRELQKRAEALIPGGVNSPVRAFRAVGGEPPILVRGEGARVFDADGNGYIDYVLSWGPLILGHAFTPVINAIEKAAEKGTSFGASTPTEADLAEAVVHAMPAIEKIRFVSSGTEATMSAIRLARGFTGRKYIVKFEGCYHGHSDSLLVKAGSGVATLGI 166          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_YERPY (Glutamate-1-semialdehyde 2,1-aminomutase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=hemL PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.560e-48
Identity = 88/161 (54.66%), Postives = 118/161 (73.29%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  +  A++L+PGGVNSPVRAF  VGG P+  +   G++++D+DG  YIDYVGSWGP I+GH    +  A+ E +++G SFGAP  +E  +A++V   VP+++MVR VNSGTEA M  +RLAR +TGR++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MSKSENLYAQAQQLIPGGVNSPVRAFTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG 161          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_PSEA83.846e-4856.17Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_CLONN3.846e-4854.72Glutamate-1-semialdehyde 2,1-aminomutase OS=Clostr... [more]
GSA_PSEPW5.023e-4855.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_PSE145.023e-4855.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_NITOC5.023e-4855.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Nitros... [more]
GSA_IDILO5.023e-4858.02Glutamate-1-semialdehyde 2,1-aminomutase OS=Idioma... [more]
GSA_HAES25.023e-4855.90Glutamate-1-semialdehyde 2,1-aminomutase OS=Haemop... [more]
GSA_ALTMD5.023e-4856.17Glutamate-1-semialdehyde 2,1-aminomutase OS=Altero... [more]
GSA_ACIBL5.023e-4858.64Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidob... [more]
GSA_YERPY6.560e-4854.66Glutamate-1-semialdehyde 2,1-aminomutase OS=Yersin... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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