FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_AZOVD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hemL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.568e-48
Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAF+ VGG P+ F   +G+++ D D   Y+DYVGSWGP I+GHA   VL A+   ++ G S+GAP  LE  +AE+V S VPS++MVR V+SGTEA M  +RLAR +TGR+ I +FEGCYHGH+D  LVKAGSG  TLG+
Sbjct:    1 MSRSETLFANAQKHIPGGVNSPVRAFRGVGGTPLFFKHAEGAYVIDEDDKRYVDYVGSWGPMILGHAHPDVLEAVRRQLEHGLSYGAPTALETEMAELVCSLVPSMDMVRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ALKOO (Glutamate-1-semialdehyde 2,1-aminomutase OS=Alkaliphilus oremlandii (strain OhILAs) GN=hemL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.568e-48
Identity = 89/162 (54.94%), Postives = 117/162 (72.22%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +K S+E    AK ++PGGVNSPVRAF +VGG P    S  G+++ D++GN YIDY+GSWGP I+GH++ ++L A+ + M KG SFGA   LE  +AE++   VPS+EMVR VNSGTEA M  LRLAR +T RE++ +F GCYHGH+D  LVKAGSG    G+
Sbjct:    1 MKKSQELMTRAKRVIPGGVNSPVRAFNAVGGCPRFIKSASGAYIQDVEGNSYIDYIGSWGPMILGHSNPKILQAVSKVMIKGLSFGAATELEVEMAELITRLVPSVEMVRMVNSGTEAVMSALRLARGYTKREKVIKFAGCYHGHSDSMLVKAGSGALVNGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHESR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella sp. (strain MR-7) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  F  AK+ +PGGVNSPVRAF  VGG P+  +   G++++D DG  YIDYVGSWGP I+GH   ++  A+   +  G SFGAP  LE  +AE VI+ VPSIE VR V+SGTEA M  +RLAR FT R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTRSEALFEQAKKTIPGGVNSPVRAFNGVGGSPLFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIREAVLAAVHNGLSFGAPTELEVQMAEKVIAMVPSIEQVRMVSSGTEATMSAIRLARGFTNRDKILKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHESM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella sp. (strain MR-4) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  F  AK+ +PGGVNSPVRAF  VGG P+  +   G++++D DG  YIDYVGSWGP I+GH   ++  A+   +  G SFGAP  LE  +AE VI+ VPSIE VR V+SGTEA M  +RLAR FT R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTRSEALFEQAKKTIPGGVNSPVRAFNGVGGSPLFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIREAVLAAVHNGLSFGAPTELEVQMAEKVIAMVPSIEQVRMVSSGTEATMSAIRLARGFTNRDKILKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHESA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella sp. (strain ANA-3) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  F  AK+ +PGGVNSPVRAF  VGG P+  +   G++++D DG  YIDYVGSWGP I+GH   ++  A+   +  G SFGAP  LE  +AE VI+ VPSIE VR V+SGTEA M  +RLAR FT R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTRSEALFEQAKKTIPGGVNSPVRAFNGVGGSPLFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIREAVLAAVHNGLSFGAPTELEVQMAEKVIAMVPSIEQVRMVSSGTEATMSAIRLARGFTNRDKILKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHEON (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella oneidensis GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  SE  F  AK+ +PGGVNSPVRAF  VGG P+  +   G++++D DG  YIDYVGSWGP I+GH   ++  A+   +  G SFGAP  LE  +AE VI+ VPSIE VR V+SGTEA M  +RLAR FT R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTRSEALFEQAKKTIPGGVNSPVRAFNGVGGSPLFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIREAVLAAVHNGLSFGAPTELEVQMAEKVIAMVPSIEQVRMVSSGTEATMSAIRLARGFTNRDKILKFEGCYHGHADCLLVKAGSGALTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEU2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F    G+++ D D   Y+DYVGSWGP I+GH+   VL A+   ++ G S+GAP  +E  +A++V   VPS+EMVR V+SGTEA M  +RLAR FTGR+ I +FEGCYHGH+D  LVKAGSG  TLG+
Sbjct:    1 MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAAGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRSQLEHGLSYGAPTAMETEMADLVCELVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSILKFEGCYHGHSDSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSESM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas syringae pv. tomato GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F    G+++ D D   Y+DYVGSWGP I+GH+   VL A+   ++ G S+GAP  +E  +A++V   VPS+EMVR V+SGTEA M  +RLAR FTGR+ I +FEGCYHGH+D  LVKAGSG  TLG+
Sbjct:    1 MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAAGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRNQLEHGLSYGAPTAMETEMADLVCELVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTLGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESAH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 94/159 (59.12%), Postives = 113/159 (71.07%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            SE  F  A + +PGGVNSPVRA  SVGG P+     +GS + D DGN YIDYVGSWGP I+GH    V+ AL E +  GTSFGAP  LE  L+++V+ AVPS+E VR VNSGTEA M  +RLAR +TGR+ I +F+G YHGHAD  LV AGSGVATL +
Sbjct:    6 SEALFKEAAKFIPGGVNSPVRACGSVGGSPLFIQKAEGSKIIDADGNVYIDYVGSWGPMILGHRHPDVVKALIEALASGTSFGAPTALETRLSQLVVEAVPSVEKVRMVNSGTEATMSAVRLARGYTGRDIIIKFDGGYHGHADTLLVAAGSGVATLNI 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_BURXL (Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkholderia xenovorans (strain LB400) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 91/161 (56.52%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  +E  F  A+  +PGGVNSPVRAF+SVGG P   +  +G++ WD DG  YIDY+GSWGP I+GH   +VL A+   +  G SFGAP   E  +AE +   VPSIE VR V+SGTEA M  LRLAR FT R RI +FEGCYHGHAD  LVKAGSG+ T G
Sbjct:    1 MSKNETLFERAQRTIPGGVNSPVRAFRSVGGTPRFIERAQGAYFWDADGQRYIDYIGSWGPMILGHVHPEVLEAVQRVLGNGFSFGAPTESEVEIAEEICKLVPSIEQVRMVSSGTEATMSALRLARGFTNRTRIVKFEGCYHGHADSLLVKAGSGLLTFG 161          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_AZOVD8.568e-4855.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Azotob... [more]
GSA_ALKOO8.568e-4854.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Alkali... [more]
GSA_SHESR1.119e-4757.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]
GSA_SHESM1.119e-4757.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]
GSA_SHESA1.119e-4757.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]
GSA_SHEON1.119e-4757.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]
GSA_PSEU21.119e-4755.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_PSESM1.119e-4755.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_DESAH1.119e-4759.12Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_BURXL1.119e-4756.52Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkho... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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