FC876179

Overview
NameFC876179
Unique NameFC876179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10304 contig Ccv1_Contig10304:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_AZOSB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Azoarcus sp. (strain BH72) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 90/158 (56.96%), Postives = 115/158 (72.78%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +E  F+ A+  +PGGVNSPVRAF+SVGG P   +  +G+ +WD DG  YIDYVGSWGPAI GH+   ++ A+ E   +G SFGAP   E  +AE++ + +PSIEM+R V+SGTEA M  +RLAR FTGR+ I +FEGCYHGHAD  LVKAGSG+ T G
Sbjct:    5 NEALFSRAQRSIPGGVNSPVRAFRSVGGTPRFIERAEGARVWDADGKAYIDYVGSWGPAIAGHSHPAIVEAVREAALRGLSFGAPTESEVEMAELLCALLPSIEMLRLVSSGTEATMSAIRLARGFTGRDDIIKFEGCYHGHADSLLVKAGSGLLTFG 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIF5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 89/160 (55.62%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            + S   F++A++ +PGGVNSPVRAF+ VGG PI  D  +G   WD++G  Y+DYVGSWGP I GH   +VLAA+   + KG  FGAP  +E  +AE+V + VP IE VR  +SGTEA M  +RLAR +TGR+RI +FEG YHGH+D  LVKAGSG  TLG
Sbjct:    3 QTSHALFHMAQQCIPGGVNSPVRAFRGVGGDPIFIDHAEGPFFWDVEGKRYLDYVGSWGPMIHGHGHPEVLAAVHAQVNKGLGFGAPTAIEVEMAELVCALVPGIESVRMTSSGTEAVMTAIRLARGYTGRDRIIKFEGNYHGHSDSLLVKAGSGALTLG 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_ACIF2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 89/160 (55.62%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  215 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            + S   F++A++ +PGGVNSPVRAF+ VGG PI  D  +G   WD++G  Y+DYVGSWGP I GH   +VLAA+   + KG  FGAP  +E  +AE+V + VP IE VR  +SGTEA M  +RLAR +TGR+RI +FEG YHGH+D  LVKAGSG  TLG
Sbjct:    3 QTSHALFHMAQQCIPGGVNSPVRAFRGVGGDPIFIDHAEGPFFWDVEGKRYLDYVGSWGPMIHGHGHPEVLAAVHAQVNKGLGFGAPTAIEVEMAELVCALVPGIESVRMTSSGTEAVMTAIRLARGYTGRDRIIKFEGNYHGHSDSLLVKAGSGALTLG 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_XANC5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 92/159 (57.86%), Postives = 109/159 (68.55%), Query Frame = 2
Query:  221 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            S   F  A+ L+PGGVNSPVRAFKSVGG+P       G +++D+D N YIDYVGSWGP I GH    V  A+   +  G SFGAPC  E  +A+ +   VPS EMVR VNSGTEA +  +RLAR  TGR RI +FEGCYHGH D FLVKAGSG+ TLG+
Sbjct:    6 SHALFAQAQTLLPGGVNSPVRAFKSVGGEPFFVARADGPYLFDVDDNRYIDYVGSWGPMIAGHNHPAVREAVERAIGNGLSFGAPCAAEVTMAQTITRLVPSCEMVRMVNSGTEATLSAVRLARGATGRNRIIKFEGCYHGHGDSFLVKAGSGMLTLGV 164          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEFS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas fluorescens (strain SBW25) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 89/162 (54.94%), Postives = 119/162 (73.46%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F   +G+++ D D   Y+DYVGSWGP I+GH+   VL A+ + ++ G S+GAP  +E  +A++V + VPS+EMVR V+SGTEA M  +RLAR FTGR+ I +FEGCYHGH+D  LVKAGSG+ T G+
Sbjct:    1 MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRKQLEHGLSYGAPTAMETEMADLVCAIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGLLTQGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_PSEE4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas entomophila (strain L48) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 89/162 (54.94%), Postives = 118/162 (72.84%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            +  SE  F  A++ +PGGVNSPVRAFKSVGG P+ F   +G+++ D D   Y+DYVGSWGP I+GH   +VL A+   ++ G S+GAP  +E  +A++V S VPS+EMVR V+SGTEA M  +RLAR +TGR+ I +FEGCYHGH+D  LVKAGSG+ T G+
Sbjct:    1 MSRSEALFAQAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVIDEDDKRYVDYVGSWGPMILGHGHPEVLDAVRNQLQHGLSYGAPTAMETEMADLVCSIVPSMEMVRMVSSGTEATMSAIRLARGYTGRDAIIKFEGCYHGHSDSLLVKAGSGLLTQGV 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_DESDG (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfovibrio desulfuricans (strain G20) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 92/162 (56.79%), Postives = 116/162 (71.60%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLGL 697
            ++ S   F  A++L+PGGVNSPVRA  SV   P+  +  +GS ++ +DG EYID+V SWGP ++GHA   V  A+ E + KG+SFGAPC  E  LAE V+ AVPSIEMVR V+SGTEA M  LRLAR +TGR ++ +FEGCYHGH D FL  AGSGVATL +
Sbjct:    1 MERSRNLFERAQKLIPGGVNSPVRACLSVDSAPVFVERGQGSKLYSVDGREYIDFVESWGPLLLGHAHPAVNKAIHEAVDKGSSFGAPCEDEIRLAEAVVDAVPSIEMVRMVSSGTEATMSALRLARGYTGRNKLIKFEGCYHGHGDAFLASAGSGVATLSI 162          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_BURPP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 91/161 (56.52%), Postives = 109/161 (67.70%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  +E  F  A+  +PGGVNSPVRAF+SVGG P   +  +G + WD DG  YIDY+GSWGP I+GH   +VL A+   +  G SFGAP   E  +AE +   VPSIE VR V+SGTEA M  LRLAR FT R RI +FEGCYHGHAD  LVKAGSG+ T G
Sbjct:    1 MSRNETLFERAQRTIPGGVNSPVRAFRSVGGTPRFIERAQGPYFWDADGQRYIDYIGSWGPMILGHVHPEVLEAVQRVLGNGFSFGAPTESEVEIAEEICKLVPSIEQVRMVSSGTEATMSALRLARGFTNRSRIVKFEGCYHGHADSLLVKAGSGLLTFG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_BORA1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Bordetella avium (strain 197N) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 91/161 (56.52%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  + E F  A   +PGGVNSPVRAF+SVGG P       G H+WD DG +YIDY+GSWGPAI+GHA  +V+ A+ +    G SFGAP   E  LAE++I  +PS+E VR V+SGTEA M  +RLAR  TGR +I +FEGCYHGH+D  LVKAGSG+ TLG
Sbjct:    1 MSRNAELFERASRSIPGGVNSPVRAFRSVGGTPRFIKRALGPHIWDADGKQYIDYLGSWGPAILGHAHPEVVRAVQDAATGGLSFGAPTEAEVELAELLIQRLPSMEQVRLVSSGTEATMTAIRLARGATGRNKIIKFEGCYHGHSDSLLVKAGSGLLTLG 161          
BLAST of FC876179 vs. ExPASy Swiss-Prot
Match: GSA_SHESH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella sediminis (strain HAW-EB3) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.909e-47
Identity = 91/161 (56.52%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  212 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIXQFEGCYHGHADPFLVKAGSGVATLG 694
            +  S+E F  AK+ +PGGVNSPVRAF  VGG P   +   G++++D DG  YIDYVGSWGP I+GH   ++  A+   ++ G SFGAP  LE  +AE VI  VPS+E VR V+SGTEA M  +RLAR FT R++I +FEGCYHGHAD  LVKAGSG  TLG
Sbjct:    1 MTRSDELFEQAKKTIPGGVNSPVRAFNGVGGSPRFIEKADGAYIYDADGKAYIDYVGSWGPMILGHNHPKIREAVLAAVENGLSFGAPTELEVTMAEKVIEMVPSMEQVRMVSSGTEATMSAIRLARGFTSRDKILKFEGCYHGHADCLLVKAGSGALTLG 161          
The following BLAST results are available for this feature:
BLAST of FC876179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_AZOSB1.119e-4756.96Glutamate-1-semialdehyde 2,1-aminomutase OS=Azoarc... [more]
GSA_ACIF51.119e-4755.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidit... [more]
GSA_ACIF21.119e-4755.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Acidit... [more]
GSA_XANC51.461e-4757.86Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_PSEFS1.461e-4754.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_PSEE41.461e-4754.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]
GSA_DESDG1.461e-4756.79Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_BURPP1.461e-4756.52Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkho... [more]
GSA_BORA11.461e-4756.52Glutamate-1-semialdehyde 2,1-aminomutase OS=Bordet... [more]
GSA_SHESH1.909e-4756.52Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]

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Properties
Property NameValue
Genbank descriptionC32001C05EF DevOvary1 Citrus clementina cDNA clone C32001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876179 ID=FC876179; Name=FC876179; organism=Citrus clementina; type=EST; length=698bp
GACAGTTTCTTATCTTGATTGACCGAGGAAAAGAGAAAGAGACATCAGAG
AGAGTGACACAAAAATGGCAGCTACAATTACAGGGGTAGGAGTTGGGTTA
GGGCTTTCATGTTCATCAAAGCTCACCAAGAGATTTTCTTCTTCTACTGG
ATCCTCTCGCTGTAGTGTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGA
AAAATTTCACTTTAAAAAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAA
TTGATGCCTGGAGGTGTAAATTCACCTGTACGTGCCTTCAAATCTGTTGG
TGGTCAACCTATTGTGTTTGATTCCGTCAAGGGCTCACACATGTGGGATA
TCGATGGCAACGAGTACATTGACTATGTAGGTTCTTGGGGGCCGGCAATT
ATTGGTCACGCAGATGATCAGGTACTAGCAGCCTTGGGTGAAACAATGAA
GAAAGGAACCAGCTTTGGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAG
AAATGGTAATCTCAGCTGTTCCAAGCATAGAAATGGTTCGTTTTGTTAAC
TCAGGCACAGAAGCATGCATGGGTGTGCTTCGCCTTGCCCGTGCCTTCAC
TGGGAGAGAGAGGATCATNCAATTTGAGGGTTGTTATCATGGCCATGCTG
ATCCATTTCTTGTCAAGGCTGGTAGTGGAGTTGCCACCCTAGGGCTTC
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