FC876214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.071e-64 Identity = 123/215 (57.21%), Postives = 163/215 (75.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+ DL ++A+ I+T +E+ QV TISANGE++IG +A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVAEVVKDLLAKAKTINTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEAKTAETELEVVDGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH601_MESSB (60 kDa chaperonin 1 OS=Mesorhizobium sp. (strain BNC1) GN=groL1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.071e-64 Identity = 122/215 (56.74%), Postives = 161/215 (74.88%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ F AR ML+GV+ +A+AVKVT+GPKGRNV+++KS G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ G+ +A+ V+ L A+ I T EE+ QV TISANGE+EIG+++A AM+KVG EGVITV + T ELE V GM+ RGY+SPYF+T+P+ ELE+ Sbjct: 3 AKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVQEGAKAVAAGMNPMDLKRGVDLAVAEVVDYLAKAAKKIKTSEEVAQVGTISANGEKEIGQMIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFITNPEKMVAELED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 121/218 (55.50%), Postives = 163/218 (74.77%), Query Frame = 3 Query: 72 VAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +AK++ FG AR ML+GV +A+AVKVT+GPKGRNV+IEKS G+P+ TKDGVTVA IE DK +++GA +VK+VA TN AGDGTT ATVLTQAI+ EG KSVAAG+N MDL+ GI++A+ + D+ R++ + + +E+ QV TISANGE EIG ++A+AM +VG EGVITV + ++ EL+ V GM+ RGY+SPYF+T+ EL+ PL Sbjct: 1 MAKEVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGSPRTTKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDTAGDGTTTATVLTQAIVREGAKSVAAGMNPMDLKRGIEIAVRTAVEDITKRSKKVKSNDEVAQVGTISANGESEIGAMIAQAMSRVGNEGVITVEEAKSLDTELDVVEGMQFDRGYLSPYFITNADKMVVELDEPL 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_MANSM (60 kDa chaperonin OS=Mannheimia succiniciproducens (strain MBEL55E) GN=groL PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 123/216 (56.94%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG AR ML GV+ +A+AVKVT+GPKGRNV+++KS G P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI A+ AV+++LK+ ++ T +EI QV TISAN + +G+L+A+AMEKVGKEGVITV DG + +EL+ V GM+ RGY+SPYF+ P+T EL++P Sbjct: 3 AKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAVVTELKALSKPCETSKEIEQVGTISANSDSIVGQLIAQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDSP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_DIAST (60 kDa chaperonin OS=Diaphorobacter sp. (strain TPSY) GN=groL PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 123/216 (56.94%), Postives = 164/216 (75.93%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKD+ FG ARA M++GV+ +A AVKVT+GPKGRNV++E+S G P VTKDGV+VA IE +DK +++GA LVK+VA TN AGDGTT ATVL QAI+ EG K VAAGLN MDL+ GI A+ A++ +LK ++ +T +EI QV +ISAN + +G+++A AM+KVGKEGVITV DG ++ NEL+ V GM+ RGY+SPYF+ +P+ Q L+NP Sbjct: 3 AKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVVALVEELKKASKATTTSKEIAQVGSISANSDESVGKIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPEKQSAILDNP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH604_RHIME (60 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 123/215 (57.21%), Postives = 163/215 (75.81%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AK++ FG AR ML+GV +A+AVKVT+GPKGRNV+I+KS G P++TKDGVTVA IE DK +++GA +V++VA TN AGDGTT ATVL QAI+ EG K+VAAG+N MDL+ GI +A+ V+ DL ++A+ I+T +E+ QV TISANGE++IG +A AM+KVG EGVITV + T ELE V GM+ RGY+SPYFVT+P+ +LE+ Sbjct: 3 AKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLAVAEVVKDLLAKAKKINTSDEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLED 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELEN 719 AKD+ FGV AR ML+GV +A AVKVT+GPKGRNV++EKS G P++TKDGVTVA IE DK +++GA +V++VA + AAGDGTT ATVL QAI+ EG KSVAAG+N MDL+ GI +A++AV++DL ++ +++ EEI QV TISANG+ EIG+ LA AM+KVG EGVITV + ++ EL+ V GM+ RGYISPYFVT+ + + E+++ Sbjct: 3 AKDVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGIDLAVEAVVADLSRNSKKVTSNEEIAQVGTISANGDSEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNAEKMRVEMDD 217
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH602_ECOK1 (60 kDa chaperonin 2 OS=Escherichia coli O1:K1 / APEC GN=groL2 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 121/216 (56.02%), Postives = 166/216 (76.85%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AKDI FG ARA M++GV+ +A AVK T+GPKGRNV++EKS G P +TKDGV+VA IE DK +++GA +VK+VA T+ AGDGTT ATVL QA++ EG K+VAAG+N MDL+ GI A+ + + +LK ++ ST +EI QV +ISAN + +IGEL+A+AM+KVGKEGVITV +G+ + NEL+ V GM+ RGY+SPYF+ +P++ + ELE+P Sbjct: 3 AKDIRFGEDARARMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGIDKAVTSAVEELKKISKPCSTSKEIAQVGSISANSDTDIGELIAKAMDKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNPQSMQAELEDP 218
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_CAEEL (Chaperonin homolog Hsp-60, mitochondrial OS=Caenorhabditis elegans GN=hsp-60 PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.826e-64 Identity = 127/232 (54.74%), Postives = 171/232 (73.71%), Query Frame = 3 Query: 30 KKGVYGRVLCNRNYVAKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENPL 725 +KG+ V+ R+Y AKD+ FG R AML GV+ +A+AV VTMGPKGRNVIIE+S G+PK+TKDGVTVA SI+ +DK +++GA L++ VA N+ AGDGTTCATVL +AI EG +S+ G N +++R G+ A++ V+++LK ++ ++TPEEI QVATISANG+ +G L++ AM+KVG GVITV DG T+ +ELE + GMK RGYISPYF+T K K E E L Sbjct: 6 RKGLQTAVV--RSY-AKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVVGNLISDAMKKVGTTGVITVKDGKTLNDELELIEGMKFDRGYISPYFITSAKGAKVEYEKAL 234
BLAST of FC876214 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.385e-64 Identity = 123/216 (56.94%), Postives = 163/216 (75.46%), Query Frame = 3 Query: 75 AKDINFGVGARAAMLQGVSEVAEAVKVTMGPKGRNVIIEKSVGNPKVTKDGVTVASSIEFRDKAKDVGANLVKQVAGATNKAAGDGTTCATVLTQAILTEGCKSVAAGLNVMDLRSGIKMAIDAVISDLKSRAQMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVVDGNTMVNELESVGGMKLARGYISPYFVTDPKTQKCELENP 722 AK++ FG AR ML GV+ +A AVKVT+GPKGRNV+++KS G+P +TKDGV+VA IE DK +++GA +VK+VA N AAGDGTT ATVL QAI+TEG K+VAAG+N MDL+ GI A+ A +++LK+ +Q + + I QVATISAN + IGE++A AMEKVGKEGVITV +G + NEL+ V GM+ RGY+SPYF+ P+T EL++P Sbjct: 3 AKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHP 218 The following BLAST results are available for this feature:
BLAST of FC876214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876214 ID=FC876214; Name=FC876214; organism=Citrus clementina; type=EST; length=725bpback to top |