FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R V++VA+NDPFI YM YM +YDS HG++ H +K ++ K ++ G K +T+F R+P I W + GA YVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 72/144 (50.00%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 72 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 503 M + +GINGFGRIGRLV R LQ+ +++VA+NDPFI YM YM KYDS HG++K E+ ++D K L+ + ++VF P EIPW + GA+YVVESTGVF V++SAPS DAPMFV+GVNE ++ P Sbjct: 1 MSDLCVGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYKG-EVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDP 141
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 ++GINGFGRIGR+V R L +V++VA+NDPFI +YM YM KYDSVHG+++ ++ KD K ++ G K ++VF R+P +IPW A YVVESTGVFT VIISAPS DAPMFV GVN +Y +L Sbjct: 4 QVGINGFGRIGRIVLRASLSNPEVQVVAINDPFIPLEYMVYMFKYDSVHGRFQ-GTVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFVCGVNLEKYTSDL 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 71/139 (51.08%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 497 VK+GINGFGRIGR+V R ++ DD+++VAVNDPFI Y YM +YDS HG +K + V+ ++ G+K V + R+P IPW+ETGA+Y+VESTGVFT VIISAPS DAPM+V+GVN Y Sbjct: 3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFK-GTIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 497 VK+GINGFGRIGR+V R L +V +VAVNDPFI +YM YM KYDSVHG++K ++ K K ++ G K ++VFG ++ IPW+ GAEY+VESTGVFT VIISAPS DAPM+V GVN Y Sbjct: 3 VKVGINGFGRIGRIVLRNALLNPEVNVVAVNDPFIALEYMVYMFKYDSVHGRFK-GTVETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYVCGVNLDSY 139
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 VK+G+NGFGRIGRLV R V++VA+NDPFI YM YM +YDS HG++ + +K ++ K ++ G K +T+F R+P I W + GAEYVVESTGVFT VIISAPS DAPMFV+GVN +Y L Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYNNTL 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.161e-32 Identity = 70/140 (50.00%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 503 K+GINGFGRIGR+V R L +++VA+NDPFI +YM YM KYDS HG++ +++KD K ++ G + V R+P +I W+ +GA+YV+ESTGVFT VIISAPSKDAPM+VVGVNE ++ P Sbjct: 5 KVGINGFGRIGRIVLRNALVAKTIQVVAINDPFIDLEYMAYMFKYDSTHGRFDG-SVEIKDGKLVIDGNA-IDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.517e-32 Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 509 + +GINGFGRIGRLV R+ L R D+++VA+NDPFI +Y +YM KYDS HG++ E+ + + ++ G+K + V+ R+P IPW + G +YV++STGVF V+I+APS APMFVVGVNE +Y P+L Sbjct: 3 ITVGINGFGRIGRLVLRIALSRKDIQIVAINDPFIAPEYASYMFKYDSTHGRYS-GEVSHEGENIVIDGKK-IRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTPDL 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.517e-32 Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = 3 Query: 72 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 497 M +K+GINGFGRIGR+V R ++ +VE+VAVNDPFI T Y YM KYDS HG + + E+K ++ L+ K V + R+P IPW ETGA+YVVESTGVFT VIISAPS DAPM+V+ VNE Y Sbjct: 1 MAPIKVGINGFGRIGRIVFRNAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIF-NGEIK-QEGNDLVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPSADAPMYVMVVNEKSY 140
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.981e-32 Identity = 74/139 (53.24%), Postives = 90/139 (64.75%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 497 VK+GINGFGRIGR+V R ++ DVE+VAVNDPFI Y YM KYDS HG +K ++V ++ G K V + R+P IPW +TGAEY+VESTGVFT VIISAPS DAPM+V+GVNE Y Sbjct: 3 VKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFK-GTIQVSGSDLIVNG-KTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |