FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.237e-17 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS--KDAPMFVVGVNEHEYKPE 506 K+++ INGFGRIGR R R + +++VA+ND +++ KYDS G + ++K+ DD + K + + R+P ++PW E + V+E TGVF V+I+AP+ KD P FVVGVNE +YK E Sbjct: 37 KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSG-GVKQASHLLKYDSTLGTFAA-DVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAPAKDKDIPTFVVGVNEGDYKHE 181
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MYCAV (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium avium GN=gapA PE=3 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 6.839e-17 Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNEHEY 497 V++GINGFGRIGR R +L + D+E+VAVND + ++ K+DS+ G+ + ++ ++ + T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + VV GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADIEVVAVND-ITDNSTLAHLLKFDSILGRLPY-DVSLEGEDTIVVGPAKIKALEVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITVVLGVNDDKY 146
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.839e-17 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNEHE 494 K+ INGFGRIGRL R IL+ +E+VA+ND + ++ KYDS G++ + E++VK+ ++ G K V VF +PE++PW E G + V+E TG FT V+ISAP+ D V VN + Sbjct: 3 KVAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRF-NGEIEVKEGAFVVNG-KEVKVFAEADPEKLPWGELGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNED 137
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_CITFR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Citrobacter freundii GN=gap PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.839e-17 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEYK 500 +V R +R D+E+VA+ND + DYM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y+ Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 125
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.839e-17 Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 506 KV++GINGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ G P++ P+++PW + G + V+E +G F VI++AP K+ + V+GVN++ Y+PE Sbjct: 2 KVRVGINGFGRMGRLALRAAWDWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLIDG-TPLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.167e-16 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 84 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNEHE 494 KI INGFGRIGRL R IL+ +E+VA+ND + ++ KYDS G++ + E++VK+ ++ G K V VF +PE++PW + G + V+E TG FT V+ISAP+ D V VN + Sbjct: 3 KIAINGFGRIGRLALRRILEVPGLEVVAIND-LTDAKMLAHLFKYDSSQGRF-NGEIEVKEGAFVVNG-KEVKVFAEADPEKLPWGDLGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNED 137
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.167e-16 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDD---VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 506 K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + ++K D + K + V RNP +PW E G + V+E TGVF V+I+AP K D P +VVGVN +Y P+ Sbjct: 67 KLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYNPD 211
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P1_ESCFE (Glyceraldehyde-3-phosphate dehydrogenase A (Fragment) OS=Escherichia fergusonii GN=gapA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.167e-16 Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 497 +V R +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N +Y Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDG-TVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.990e-16 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEY 497 V++GINGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + V+GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.990e-16 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEY 497 V++GINGFGRIGR R +L + DVE+VA ND + ++ K+DS+ G+ ++ ++ D T++ G + VR P +PW + G + VVESTG+FT VIISAP+ D + V+GVN+ +Y Sbjct: 3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |