FC876224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.990e-16 Identity = 46/144 (31.94%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 78 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNEHEYKPE 506 K+++GINGFGR+GRL R ++E V +N+ ++ K+DSVHG+W E++ + ++ L+ P++ PE++PW + G + V+E +G F VI++AP K+ + V+GVN++ Y+PE Sbjct: 2 KIRVGINGFGRMGRLALRAAWGWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLI-DSTPLSFSEYGKPEDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_SEROD (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia odorifera GN=gap PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.599e-16 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 497 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+ + V ++P + W E G + V E+TG+F V+++ PSK D PMFV+GVN Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGSVEVKDGHLVVNGQT-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMGVNLKSY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.599e-16 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 497 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G+K + V R+P + W E G E V E+TG+F V+++ PSKD+ PMFV G N Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWNEAGVEVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDSTPMFVRGANFDTY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.394e-16 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNEHEY 497 +V R +R D+E+VA+ND + +YM YM KYDS HG++ + ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKDA PMFV G N +Y Sbjct: 1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGANFDKY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.394e-16 Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 69 IMGKVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 497 + K+K+ INGFGRIGR R R D +++V +ND +++ KYDS+ G + ++K D + K + V RNP +PW + G + V+E TGVF V+I+AP K D P +VVGVNE Y Sbjct: 63 VEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDA-DVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGY 206
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.790e-16 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 96 NGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYK 500 NGFGRIGR R + R + +E++A+ND +++ KYDS G++ ++K+ DD + K + V R+P ++PW E + V+E TGVF V+I+AP+K D P +VVGVN H+YK Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16 Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVIL----QRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAET-GAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPS-KDAPMFVVGVNE 488 VKIGINGFGRIGRL R I+ + D+E+VA+ND T + ++ KYDS HG + HE+ +D ++ G+K V+ + IPW + G ++V+E TG +T V+ISAP+ D V VN+ Sbjct: 3 VKIGINGFGRIGRLAFRRIMDLGEETKDIEVVAIND-LTTPAMLAHLLKYDSTHGTF-DHEVSATEDSLVVDGKK-YRVYAEPQAQNIPWVKNDGVDFVLECTGFYTSKAKSQAHLDAGAKRVLISAPAGNDLKTIVYSVNQ 141
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.876e-16 Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNEHEY 497 +V R +R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V R+P + W E G + V E+TG+F V+++ PSKD PMFV G N Y Sbjct: 1 IVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDTY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3P_ESCHE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia hermannii GN=gap PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.685e-15 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 120 LVARVILQRDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEY 497 +V R R D+E+VA+ND + +YM YM KYDS HG++ ++VKD ++ G+K + V ++P + W E G + V E+TG+F V+++ PSK D PMFV G N +Y Sbjct: 1 IVFRAAQTRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDDTPMFVKGANFDKY 124
BLAST of FC876224 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.685e-15 Identity = 54/140 (38.57%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 81 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMCKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVN 485 +K+ ING+GRIGR V R + R D+E+VA+ND ++ +YD+VHG++ E+ V D + G++ + V RNP E+PW E G + V+E TG+FT VIISAP KD +V GVN Sbjct: 3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAIND-LGNAATNAHLTQYDTVHGRFPG-EVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVN 139 The following BLAST results are available for this feature:
BLAST of FC876224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876224 ID=FC876224; Name=FC876224; organism=Citrus clementina; type=EST; length=509bpback to top |