FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22
Identity = 68/224 (30.36%), Postives = 108/224 (48.21%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR 684
            P  WR M GV+ +P+++  + M F PESPRWL  +    +A   +  +Y   R+ + +  LSA+ +     +    + D+F S+  +                 IN V+YYS ++ + AG QS+            +N  GT V   L+D  GRK L L+S  G+ +S++LLS +F            G +AV+G  LY+  F+ G GPVP  L  E++  + R
Sbjct:  260 PLWWRTMFGVAVIPSVLLAIGMAFSPESPRWLVQQGKVSEAEKAIKTLYGKERVVELVRDLSASGQGS--SEPEAGWFDLFSSRYWK-VVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIQSD---VAASALVGASNVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLLLSLSFTWKALAAYS---GTLAVVGTVLYVLSFSLGAGPVPALLLPEIFASRIR 474          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 65/228 (28.51%), Postives = 110/228 (48.25%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMS 705
            WR+ML + AVPAI+ F  ML +PESPRWL  K    +A+ VL +I +  R E E   +  A E++   +K    L  F +  +R                 +N++MYY   I++ +GF +              + +  I GI+L+    R+ + L  LAG   +L+L++   I            ++ +    L++AF    +GPV W + +E++P++ RG+  G+S
Sbjct:  173 WRYMLVICAVPAIMLFASMLKVPESPRWLISKGKNSEALRVLKQIREDKRAEAECREIQEAVEKDTALEKA--SLKDFSTPWLRRLLWIGIGVAIVNQITGVNSIMYYGTQILKESGFGTKAALIANIGNGL-ISVIAVIFGIWLVGKVRRRPILLIGLAGTTTALLLIA---IFSIVLDGSMALPYVVLSLTVLFLAFMQGCVGPVTWLVIAEIFPQRLRGLGSGIS 394          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 68/232 (29.31%), Postives = 113/232 (48.71%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLS-AAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTV 714
            WR+ML ++++PA+  F  M+ MPESPRWL  K  KE A+ VL KI D  R   E+  +  A  +E+  +K T + L V     +R                 +N++MYY   I++ +GFQ+ +            + + T VGI+L+   GR+ + ++ L G   +L+L+    I            ++ +     ++AF    + PV W + SE++P + RG+  GM  TV
Sbjct:  173 WRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDEKRAAAELQEIEFAFKKEDQLEKATFKDLSV---PWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQT-EAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIG---IFSLVLEGSPALPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGL--GMGVTV 395          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 68/257 (26.46%), Postives = 124/257 (48.25%), Query Frame = 1
Query:   10 VPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEI-----DHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXI------NTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL--LSWAFIXXXXXXXXXV--------YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            V   WR ++G+S +P ++ F    F+P++PR+  MK D ++A +VL + Y     EDEI     + LS+  +    K    ++ ++   KE+                  I      N++MY+S TI +  GF+++           GTN V T++  + ID  GR+ + L  L G+ ++LV+  +++ F+         V        +G + ++ + +Y AF+A G+G VPW   SE++P+  RG+    ++  N
Sbjct:  264 VKNGWRILVGLSLIPTVLQFSFFCFLPDTPRYYVMKGDLKRAKMVLKRSY--VNTEDEIIDQKVEELSSLNQSIPGKNPITKFWNMV--KELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSS---AVSIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPWQ-QSELFPQNVRGVGTSYATATN 512          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20
Identity = 66/246 (26.83%), Postives = 115/246 (46.75%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIAR---LEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXX----INTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-------IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WRWM+G++ VPA     +++++PESPR L  K   ++A   L++IY  A    ++ ++  +     +     +  + +  FK                           N++MY+S TI ++ GF +             TN V TIV   +ID FGR+ L L ++ G+I +L++ + AF                  +  + +I + +Y+A +A G+G +PW   SE++P   RG+  GMS+ VN
Sbjct:  246 WRWMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIYPTAHPYEIKTKLYLIQEGVRDPFSGSRWQKIVKTFKELYFNPSNFRALILACGLQAMQQLSGFNSLMYFSSTIFEVVGFNN---PTATGLIIAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASGLGNLPWQ-QSELFPMSVRGLGTGMSTAVN 487          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +LG+SAVPAI+  +L+ F PESPR+L++K D+E KA   L ++     +  +I  +    EE   +KK V  + +F +   R                 IN + YYS +I Q AG                 N V T V ++L++  GR+ L L  ++G+ +  + +S   +            ++++  + L+++FF  G GP+PW + +E + +
Sbjct:  216 WHILLGLSAVPAILQCLLLFFCPESPRYLYIKLDEEAKAKKSLKRLRGSDDITKDITEMRKEREEASNEKK-VSIIQLFTNASYRQPILVALMLHAAQQFSGINGIFYYSTSIFQTAGISQ---PVYATIGVGAVNTVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLLSKFPW---MNYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQ 427          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ARAE_BACSU (Arabinose-proton symporter OS=Bacillus subtilis GN=araE PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 61/234 (26.07%), Postives = 108/234 (46.15%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSS 708
            GV   WRWML    VP++I F+++L +PESPRWL       +A+ +L++I      ++E+ ++    E  L+ ++      +FK   +R                 +N + YY P I +M GF  N               + T++ + LID  GRKKL     A + I ++L+  +F            G + ++ +  ++A F   +GP+ W + SE++P   R    G+++
Sbjct:  181 GVHTGWRWMLAYGMVPSVIFFLVLLVVPESPRWLAKAGKTNEALKILTRINGETVAKEELKNI----ENSLKIEQMGSLSQLFK-PGLRKALVIGILLALFNQVIGMNAITYYGPEIFKMMGFGQNAGFVTTCIVGV-VEVIFTVIAVLLIDKVGRKKLMSIGSAFMAIFMILIGTSF------YFELTSGIMMIVLILGFVAAFCVSVGPITWIMISEIFPNHLRARAAGIAT 402          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 68/238 (28.57%), Postives = 113/238 (47.48%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM---KSDKEKAILVL-SKIYDIARLEDEI-DHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            TWR +  +  +P    F+ + F+PESPRWL      ++ E A+  L  K  DI+    EI D++     E L +    + LD+F+ + IR                 IN + +Y+ +I + AGF +                V T +   ++D  GRK L L S  G++I  ++ + +F              +AV+G+ +YI  F+ GMG +PW + SE++P   +G+ GGM++ VN
Sbjct:  178 TWRVLALIGIIPCAASFLGLFFIPESPRWLAKVGRDTEFEAALRKLRGKKADISEEAAEIQDYI-----ETLERLPKAKMLDLFQRRYIRSVLIAFGLMVFQQFGG-INGICFYTSSIFEQAGFPTRLGMIIYAVL----QVVITALNAPIVDRAGRKPLLLVSATGLVIGCLIAAVSFYLKVHDMAHEAVPVLAVVGIMVYIGSFSAGMGAMPWVVMSEIFPINIKGVAGGMATLVN 405          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 69/240 (28.75%), Postives = 114/240 (47.50%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLF---MKSDKEKAILVLSKIY-DIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IXXXXXXXXXVYGWIA---VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR +  +  +P  +    + F+PESPRWL    M  + E ++ VL     DI    +EI    A++     K+ TVR++D+ K +                    IN V++YS TI + AG  S+               V T +  +L+D  GR+ L   S  G+ ISLV+++ AF +         +Y W++   V+G+   + FF+ GMGP+PW + SE+ P   +G+ G +++  N
Sbjct:  199 WRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDITVEVNEIKRSVASST----KRNTVRFVDL-KRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAATFGVG---AIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLAN 430          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19
Identity = 70/234 (29.91%), Postives = 109/234 (46.58%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKI--YDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WRWMLG +A+PA + F+  L +PESPR+L      ++A  VL  +  +D   +  EI+ +  +A     K  +  + ++F  K +R                  NTV+YY+PTI    GF  +             N + T + + ++D   RKK+      G+ ISL ++S   I             I+VI L +YIAFF+   GPV W +  EV+P   RG+    +S +N
Sbjct:  162 WRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQVAVNKEINDIQESA-----KIVSGGWSELF-GKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGI-FNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMS---IGMKFSGGSQTAAIISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVIN 385          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PLST4_ARATH8.447e-2230.36Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
YNCC_BACSU2.458e-2128.51Putative metabolite transport protein yncC OS=Baci... [more]
IOLT_BACSU1.220e-2029.31Major myo-inositol transporter iolT OS=Bacillus su... [more]
ITR2_YEAST4.635e-2026.46Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
ITR1_SCHPO4.635e-2026.83Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
GTR2_BOVIN6.053e-2027.40Solute carrier family 2, facilitated glucose trans... [more]
ARAE_BACSU6.053e-2026.07Arabinose-proton symporter OS=Bacillus subtilis GN... [more]
ERDL7_ARATH7.906e-2028.57Sugar transporter ERD6-like 7 OS=Arabidopsis thali... [more]
ERDL6_ARATH7.906e-2028.75Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
XYLT_LACBR1.349e-1929.91D-xylose-proton symporter OS=Lactobacillus brevis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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