FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18
Identity = 57/219 (26.03%), Postives = 107/219 (48.86%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +L +  +PA++  +++ F PESPR+L + ++++ +A  VL K+   A +  ++  +   + + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    +L++ A               +A+ G   ++AFF  G GP+PW + +E++ +
Sbjct:  186 WPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKK-VTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQ 397          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18
Identity = 65/236 (27.54%), Postives = 108/236 (45.76%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV----LLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG++ VPA++  V   F+P++P  +  + +KEKA  +L KI     +E E + L  A   E  KK    + ++ +++  R                 IN +M+Y+P + +  GF  N             N + TIV IY +D FGR+ L L     +I++ +    ++ W F          V   I +  + LY+A FA   GP+ W + SE+ P + R     ++ +VN
Sbjct:  203 WRLSLGLAGVPAVMMLVGCFFLPDTPNSILERGNKEKAKEMLQKIRGTMEVEHEFNELCNAC--EAAKKVKHPWTNIMQAR-YRPQLTFCTFIPFFQQLTGINVIMFYAPVLFKTIGF-GNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIGWKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVN 434          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18
Identity = 60/224 (26.79%), Postives = 104/224 (46.43%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            G    W  +LG + VPA++  V +LF PESPR+L + K ++EKA  VL K+     +  +I  +   + +  ++KK    L++F+S   R                 IN V YYS  I + AG                 N V T+V ++L++  GR+ L L  L G+ +   +++ A              +I+++    ++A F  G GP+PW + +E++ +
Sbjct:  180 GTEALWPLLLGFTIVPAVLQCVALLFCPESPRFLLINKMEEEKAQTVLQKLRGTQDVSQDISEMKEESAKMSQEKKAT-VLELFRSPNYRQPIIISITLQLSQQLSGINAVFYYSTGIFERAGITQ---PVYATIGAGVVNTVFTVVSLFLVERAGRRTLHLVGLGGMAVCAAVMTIALALKEKWIR-----YISIVATFGFVALFEIGPGPIPWFIVAELFSQ 394          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18
Identity = 69/251 (27.49%), Postives = 108/251 (43.03%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD-----IARLEDEIDHLSA-----------AAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLA---LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR MLG+ AVP++I  + +L MPESPRWL M+     A  VL K  D       RLED I H +             +      +   R L +  +  +R                 I+ V+ +SP I + AG +++                  +V  +L+D  GR+ L L+S+ G+++SL  L  +           +  W  V+ +A    Y+A F+ G GP+ W  +SE++P + R     M   VN
Sbjct:  194 WRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLED-IKHAAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVM--WAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVN 441          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18
Identity = 66/247 (26.72%), Postives = 108/247 (43.72%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKA--ILVL---------SKIYDIARLED----EIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR MLG++A P++I    +  MPESPRWL M+   E+A  I+VL          +  DI    +    EI  +    +++   K   R L +     +R                 I  V+ YSP I + AG  S             T A   I+  +L+D  GR+KL L+S  G++ +L  L+ +               ++++    ++AFF+ G+GP+ W  +SE++P + R     +   VN
Sbjct:  180 WRLMLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVN 426          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18
Identity = 67/251 (26.69%), Postives = 119/251 (47.41%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD------IARLEDEIDHLSAAAEEELRKKK---TVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----------IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR ++G+S +P  + F  + F+P++PR+  MK D  +A  VL + Y       I R  +E+  L+ +   +   +K   T++ L    S  +R                  N++MY+S TI +  GF+++           GTN + T+V  + ID  GR+ + L  L G+ ++LV+ S AF          +          +G + ++ + ++ AF+A G+G VPW   SE++P+  RGI    ++  N
Sbjct:  245 WRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPSN-LRALIIGCGLQAIQQFTGW-NSLMYFSGTIFETVGFKNSSAVSIIVS---GTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQ-QSELFPQNVRGIGTSYATATN 489          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 61/227 (26.87%), Postives = 108/227 (47.58%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR--KKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVI---GLALYIAFFAPGMGPVPWTLNSEVY 669
            G    W  +LG + +PAII    + F PESPR+L + + ++EKA  +L +++     ED    +    +E +R  ++K V  L++F++   R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L L  L G+    +L++ + +          Y W++ I    + +++AFF  G GP+PW + +E++
Sbjct:  179 GTEDLWPLLLGFTILPAIIQCAALPFCPESPRFLLINRKEEEKAKEILQRLWG---TEDVAQDIQEMKDESMRMSQEKQVTVLELFRAPNYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVQE---PVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDN------YSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELF 393          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 57/221 (25.79%), Postives = 107/221 (48.42%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR--KKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +LG++ +PAI+    + F PESPR+L + + ++++A  +L +++    +  EI  +    +E +R  ++K V  L++FKS                     IN V YYS  I Q AG Q               N + T+V ++L++  GR+ L +  L G+ +  V ++   I            ++ ++ + +Y+AFF  G GP+PW + +E++ +
Sbjct:  184 WPGLLGLTIIPAILQSAALPFCPESPRFLLINRKEEDQATEILQRLWGTPDVIQEIQEMK---DESIRMSQEKQVTVLELFKSPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIFQDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMT---ISLLLKDEYEAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQ 395          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 61/227 (26.87%), Postives = 108/227 (47.58%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR--KKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVI---GLALYIAFFAPGMGPVPWTLNSEVY 669
            G    W  +LG + +PAII    + F PESPR+L + + ++EKA  +L +++     ED    +    +E +R  ++K V  L++F++   R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L L  L G+    +L++ + +          Y W++ I    + +++AFF  G GP+PW + +E++
Sbjct:  179 GTEDLWPLLLGFTILPAIIQCAALPFCPESPRFLLINRKEEEKAKEILQRLWG---TEDVAQDIQEMKDESMRMSQEKQVTVLELFRAPNYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVQE---PVYATIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDN------YSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELF 393          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18
Identity = 57/222 (25.68%), Postives = 105/222 (47.30%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLA---LYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +LG+SAVPA++  +L+LF PESPR+L++K ++E +A   L ++     +  +I+ +    EE   ++K V  + +F     R                 IN + YYS +I Q AG                 N + T V + L++  GR+ L L+ + G+    + +S   +          + W++ + +    L+++FF  G GP+PW + +E + +
Sbjct:  217 WHILLGLSAVPALLQCLLLLFCPESPRYLYIKLEEEVRAKKSLKRLRGTEDVTKDINEMKKEKEEASTEQK-VSVIQLFTDANYRQPILVALMLHMAQQFSGINGIFYYSTSIFQTAGISQ---PVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVLLDK------FAWMSYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQ 428          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
GTR1_HUMAN1.947e-1826.03Solute carrier family 2, facilitated glucose trans... [more]
STP11_ARATH2.543e-1827.54Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
GTR3_CHICK2.543e-1826.79Solute carrier family 2, facilitated glucose trans... [more]
PLT5_ARATH3.322e-1827.49Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT3_ARATH3.322e-1826.72Probable polyol transporter 3 OS=Arabidopsis thali... [more]
ITR1_YEAST3.322e-1826.69Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
GTR3_SHEEP4.338e-1826.87Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT4.338e-1825.79Solute carrier family 2, facilitated glucose trans... [more]
GTR3_BOVIN4.338e-1826.87Solute carrier family 2, facilitated glucose trans... [more]
GTR2_MOUSE4.338e-1825.68Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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