FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17
Identity = 64/241 (26.56%), Postives = 108/241 (44.81%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDI-ARLEDEIDHLSAAAEE-ELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            +W+ +      P I+    + F+PESPRWL     +++  + L K+    A + +E D +  + +  E+  K  ++ L    SK+                   IN + +Y+      AGF S +          GT A+       T++G  LID  GR+ L + S  G+ +  +L   +F+             +AV G+ +Y+A F+ GMGPVPW + SE++P   +GI G +   VN
Sbjct:  194 SWKTLALTGLAPCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNEADGIQVSIQALEILPKARIQDL---VSKKYGRSVIIGVSLMVFQQFVGINGIGFYASETFVKAGFTSGKL---------GTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQSLLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVN 422          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.069e-16
Identity = 64/240 (26.67%), Postives = 110/240 (45.83%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLF---MKSDKEKAILVLSKIY-DIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR +  +  +P  +    + F+PESPRWL    +  D E ++ VL     DI    +EI    A++     K+  VR++D+ K +                    IN V++YS TI + AG  S+               V T +  +L+D  GR+ L + S  G+ ISLV+++ AF              +   ++V+G+   +   + GMGP+PW + SE+ P   +G+ G +++ +N
Sbjct:  200 WRILAVLGVLPCTLLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDITVEVNEIKRSVASSS----KRSAVRFVDL-KRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVATFGVGV---VQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLN 431          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16
Identity = 67/222 (30.18%), Postives = 100/222 (45.05%), Query Frame = 1
Query:   16 GTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDI-ARLEDEIDHLSAAAEEELRKKKTVRYLDVFK-SKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRK-KLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP 672
            G WRWMLGV  +PAI+  + + F+P+SPRW   K     A  VL ++ D  A  + E+D +     E L+ K++   L  FK +   R                 +N +MYY+P I ++AG+ +             TN + T + I L+D +GRK  L L  L       VL +   I            + A+  L ++I  FA   GP+ W L SE+ P
Sbjct:  168 GAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEI----RESLQVKQSGWAL--FKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQ----YFAIAMLLMFIVGFAMSAGPLIWVLCSEIQP 379          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16
Identity = 67/222 (30.18%), Postives = 100/222 (45.05%), Query Frame = 1
Query:   16 GTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDI-ARLEDEIDHLSAAAEEELRKKKTVRYLDVFK-SKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRK-KLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP 672
            G WRWMLGV  +PAI+  + + F+P+SPRW   K     A  VL ++ D  A  + E+D +     E L+ K++   L  FK +   R                 +N +MYY+P I ++AG+ +             TN + T + I L+D +GRK  L L  L       VL +   I            + A+  L ++I  FA   GP+ W L SE+ P
Sbjct:  168 GAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEI----RESLQVKQSGWAL--FKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQ----YFAIAMLLMFIVGFAMSAGPLIWVLCSEIQP 379          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 58/229 (25.33%), Postives = 105/229 (45.85%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSS 708
            WR+ML ++ +PA++ +  ML +PESPRWL  K     A+ VL +I + ++ + EI  +  A E   +K         F+   IR                 +N++MYY   I++ AGFQ+ +            + +  I GI+L+    R+ + +    G + +L+L+    I            ++ +    L++AF    +  V W + SE++P   RG+  G+S+
Sbjct:  183 WRYMLVIATLPAVVLWFGMLIVPESPRWLAAKGRMGDALRVLRQIREDSQAQQEIKEIKHAIEGTAKKAG----FHDFQEPWIRRILFIGIGIAIVQQITGVNSIMYYGTEILREAGFQT-EAALIGNIANGVISVIAVIFGIWLLGKVRRRPMLIIGQIGTMTALLLIG---ILSIVLEGTPALPYVVLSLTILFLAFQQTAISTVTWLMLSEIFPMHVRGLGMGIST 403          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 61/231 (26.41%), Postives = 107/231 (46.32%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKE----KAILVLSKIYDI----ARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            G    W  +LG++ +PA++  VL+ F PESPR+L++  + E    K++  L+   D+    A L+DE        + +L +++ +  L +  S+  R                 IN V YYS +I + AG                 N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +
Sbjct:  197 GTASLWPLLLGLTVLPALLQLVLLPFCPESPRYLYIIQNLEGPARKSLKRLTGWADVSGVLAELKDE--------KRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFETAGVGQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQ 413          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 57/224 (25.45%), Postives = 105/224 (46.88%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            G    W  +L ++ +PA++  +L+ F PESPR+L++  + E  A   L ++   A + D +  L    + +L +++ +  L +  S+  R                 IN V YYS +I ++AG +               N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +
Sbjct:  197 GTATLWPLLLAITVLPALLQLLLLPFCPESPRYLYIIRNLEGPARKSLKRLTGWADVSDALAELK-DEKRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFELAGVEQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPSMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQ 413          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 56/227 (24.67%), Postives = 105/227 (46.26%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLF----MKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            G    W  +LG++ +PA++  VL+   PESPR+L+    ++    K++  L+   D++ +  E+       + +L +++ +  L +  S   R                 IN V YYS +I + AG +               N V T+V ++L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +
Sbjct:  197 GTATLWPLLLGITVLPALLQMVLLPLCPESPRYLYIIRNLEGPARKSLKRLTGWADVSEVLAELKE----EKRKLERERPLSLLQLLGSHTHRQPLVIAIVLQLSQQLSGINAVFYYSTSIFESAGVEKPAYATIGAGV---VNTVFTLVSVFLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQ 413          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 60/237 (25.32%), Postives = 104/237 (43.88%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG++AVPA+I  +    +P++P  +  +   E+A  +L KI     +++E   L  A   E  KK    + ++F+  + R                 IN +M+Y+P + +  GF ++             N V T+V IY +D +GR+ L L     +I+S +++                      WI    + LY+A FA   GP+ W + SE+ P + R     ++ +VN
Sbjct:  202 WRVSLGLAAVPAVIMVIGSFVLPDTPNSMLERGKYEQAREMLQKIRGADNVDEEFQDLCDAC--EAAKKVDNPWKNIFQQAKYRPALVFCSAIPFFQQITGINVIMFYAPVLFKTLGF-ADDASLISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLTPATADWILAF-ICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVN 434          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 59/224 (26.34%), Postives = 99/224 (44.20%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALS---SLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR 684
            WR+ LG +AVPA+I  +   F+ E+P  L  +   EK   VL KI  I  +E E + +  A E   + K    + ++F   E R                 IN VM+Y+P + Q  G   N           G NA+ T++ + ++D  GR+ L +     +    +++  +  A +             I +I + +Y++ FA   GP+ W + SE+YP + R
Sbjct:  198 WRYSLGGAAVPALILLIGSFFIHETPASLIERGKDEKGKQVLRKIRGIEDIELEFNEIKYATEVATKVKSP--FKELFTKSENRPPLVCGTLLQFFQQFTGINVVMFYAPVLFQTMGSGDN-ASLISTVVTNGVNAIATVISLLVVDFAGRRCLLMEGALQMTATQMTIGGILLAHLKLVGPITGHAVPLIVLILICVYVSGFAWSWGPLGWLVPSEIYPLEVR 418          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
EDL16_ARATH6.264e-1726.56Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
ERDL4_ARATH1.069e-1626.67Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
GALP_ECOLI1.823e-1630.18Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL61.823e-1630.18Galactose-proton symporter OS=Escherichia coli O6 ... [more]
YFIG_BACSU3.109e-1625.33Putative metabolite transport protein yfiG OS=Baci... [more]
GTR4_HUMAN4.060e-1626.41Solute carrier family 2, facilitated glucose trans... [more]
GTR4_RAT5.303e-1625.45Solute carrier family 2, facilitated glucose trans... [more]
GTR4_BOVIN5.303e-1624.67Solute carrier family 2, facilitated glucose trans... [more]
STP9_ARATH9.046e-1625.32Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STP2_ARATH9.046e-1626.34Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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