FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 62/242 (25.62%), Postives = 113/242 (46.69%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLF-MKSDKE---KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR +  + A+P  I  + + F+PESPRWL  + SDKE     + +     DI+R   +I+ ++   E + +      + D+F+ K  R                  + V+ Y+ TI++ AGF              G+  +G       ++G+ L+D +GR+ L L+S++G+ I+ +L+  AF          +      I + LYI  +A G+G +PW + SE++P   +   G + + V+
Sbjct:  186 WRILALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLLRLRGGNADISREASDIEVMTKMVENDSKSS----FCDLFQRK-YRYTLVVGIGLMLIQQFSGSSAVLSYASTILRKAGFS----------VTIGSTLLGLFMIPKAMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKMQLLPELTPVFTFICVTLYIGTYAIGLGGLPWVIMSEIFPMNIKVTAGSIVTLVS 412          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIHFVLMLFMPESPRWLF-MKSDKE---KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            TWR +  + A+P  I  + + F+PESPRWL  + SDKE       +  +  DI+R   EI  ++   E + +      + D+F+ K  R                    V+ Y+ TI + AGF              GT  +G       ++G+ L+D +GR+ L ++S  G+ ++ +LL  AF          +   ++ I + +YIA +A G+G +PW + SE++P   +   G + + V+
Sbjct:  181 TWRTLALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLFRLRGRDADISREASEIQVMTKMVENDSKSS----FSDLFQRK-YRYTLVVGIGLMLIQQFSGSAAVISYASTIFRKAGFS----------VAIGTTMLGIFVIPKAMIGLILVDKWGRRPLLMTSAFGMSMTCMLLGVAFTLQKMQLLSELTPILSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVS 408          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 63/237 (26.58%), Postives = 105/237 (44.30%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG + VPA+I  V  L +P++P  +  +     A   L KI  +  ++DEI+ L  A+E     +   R L     ++ R                 IN +M+Y+P + Q  GF S+             N   T+V IY +D +GR+ L L     ++IS V ++ A      +          Y  + V+ + +Y+A FA   GP+ W + SE++P + R     ++ +VN
Sbjct:  199 WRLSLGGAVVPALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNL---LQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGL-VNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVN 431          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 51/219 (23.29%), Postives = 102/219 (46.58%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +LG + +PAI+    + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+    R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++AFF  G GP+PW + +E++ +
Sbjct:  184 WPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDES-ARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNG---MSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQ 395          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 57/224 (25.45%), Postives = 103/224 (45.98%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            G    W  +L ++ +PA++  +L+ F PESPR+L++  + E  A   L ++   A + D +  L    + +L +++ +  L +  S+  R                 IN V YYS +I + AG                 N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +
Sbjct:  197 GTATLWPLLLALTVLPALLQLILLPFCPESPRYLYIIRNLEGPARKSLKRLTGWADVSDALAELK-DEKRKLERERPMSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFESAGVGQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQ 413          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 58/233 (24.89%), Postives = 106/233 (45.49%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMK---------SDKEKAILVLSKIYDIARLEDEIDHLSAAAEEE--LRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG 687
            WR+M   S   A+I  + M ++P SPRWL ++         + +E AI  L  +   A ++   + ++    E   + + K V + ++F+ K ++                   +V+YY+P+I+Q AGF +                + T V + +ID  GR+ L L  + G+++SL LL   ++             +AV+ L LY+  +    GP+ W + SE++P + RG
Sbjct:  210 WRYMYATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFGELFQGKCLKALIIGGGLVLFQQITGQ-PSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPV------VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRG 435          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 50/219 (22.83%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE 675
            W  +LG + +P I+    + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+    R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++AFF  G GP+PW + +E++ +
Sbjct:  184 WPLLLGFTILPTILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDES-ARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNG---MSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQ 395          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14
Identity = 64/245 (26.12%), Postives = 109/245 (44.49%), Query Frame = 1
Query:   10 VPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKS---------DKEKAILVLSKI--------YDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS--WAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG 687
            V G WR+M G     A++  + M  +P SPRWL +++          KEKA+L LSK+             ++D    +  A E+E   K    +L+VF+   ++                   +V+YY+ +I+Q AGF +                + T V +  +D  GR+ L +  ++G+ +SL LLS  + F+          +  +AV  L LY+  +    GP+ W + SE++P + RG
Sbjct:  257 VVGGWRYMYGFGTPVALLMGLGMWSLPASPRWLLLRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVDDAYLSVKTAYEDE---KSGGNFLEVFQGPNLKALTIGGGLVLFQQITGQ-PSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFLGG--------FPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRG 489          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 57/237 (24.05%), Postives = 101/237 (42.62%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG + VPA+I  +  L +P++P  +  +   E+A   L +I  +  +  E D L AA++E    +   R L     ++ R                 IN +M+Y+P +    GF +              N   T+V IY +D +GR+ L L     ++I   +++        +          Y  + V  + +Y+A FA   GP+ W + SE++P + R     ++ +VN
Sbjct:  201 WRLSLGGAVVPALIITIGSLVLPDTPNSMIERGQHEEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNL---LRRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGF-TTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVN 433          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 56/237 (23.63%), Postives = 101/237 (42.62%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKI----YDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            +WR +  + ++P  I  + + F+PESPRWL  K   ++   VL K+    YDI     EI      + E  +K   +    +F+ K                       +  Y  T+ ++AGF +                  +++G+ L+D +GR+ L ++S  G+ +S + L+ AF          +      IG+  +   FA GMG +PW + SE++P   + + G + +  N
Sbjct:  176 SWRTLAIIGSIPCWIQVIGLFFIPESPRWLAKKGRDKECEEVLQKLRGRKYDIVPEACEI----KISVEASKKNSNINIRSLFE-KRYAHQLTIGIGLMLLQQLCGTAGISSYGSTLFKLAGFPARIGMMVLSLIV----VPKSLMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFGVKDVPGIGKITPIFCFIGILSFTMMFAIGMGALPWIIMSEIFPMDIKVLAGSLVTIAN 403          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
EDL18_ARATH9.046e-1625.62Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
EDL17_ARATH9.046e-1626.34Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
STP12_ARATH1.181e-1526.58Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
GTR3_HUMAN2.632e-1523.29Solute carrier family 2, facilitated glucose trans... [more]
GTR4_MOUSE3.437e-1525.45Solute carrier family 2, facilitated glucose trans... [more]
XYLL2_ARATH5.863e-1524.89D-xylose-proton symporter-like 2 OS=Arabidopsis th... [more]
GTR3_PONAB7.658e-1522.83Solute carrier family 2, facilitated glucose trans... [more]
XYLL3_ARATH2.228e-1426.12D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
STP1_ARATH3.800e-1424.05Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
EDL12_ARATH3.800e-1423.63Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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