FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 60/238 (25.21%), Postives = 102/238 (42.86%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI------XXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG++AVPA++  +    +P++P  +  +   E+A  +L KI     ++ E   L  A   E  KK    + ++ +SK  R                 IN +M+Y+P + +  GF  +             N + T V IY +D +GR+ L L     + I  +L+  +FI                  WI    + +Y+A FA   GP+ W + SE+ P + R     ++ +VN
Sbjct:  202 WRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRGADNVDHEFQDLIDAV--EAAKKVENPWKNIMESK-YRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGF-GDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVG-SFIGARFGTSGTGTLTPATADWILAF-ICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVN 433          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 58/233 (24.89%), Postives = 102/233 (43.78%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAI---LVLSKIYDIARLEDEIDHLSAAAEEE--------LRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG 687
            WR+M        +I    M ++P SPRWL +++ + +     L  + I  + RL   +   SAA +          + + K   + ++F+ K ++                   +V+YY+P+I+Q AGF +                V T V + +ID  GR+ L L  ++G++ISL LL   ++             +AV  L LY+  +    GP+ W + SE++P + RG
Sbjct:  210 WRYMYATILPFPVIMGTGMCWLPASPRWLLLRALQGQGNGENLQQAAIRSLCRLRGSVIADSAAEQVNEILAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQ-PSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPA------VAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRG 435          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 60/236 (25.42%), Postives = 100/236 (42.37%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW--IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTV 714
            P  WR  LG++A PA++  +   F+PE+P  L  +   E+   VL K+     +  E+  +  A+E     K   R +     K  R                 IN++++Y+P + Q  GF  N               + T + I L+D  GR+ L ++    +II  V+++               G+  I VI + L++  F    GP+ WT+ SE++P + R    G S TV
Sbjct:  200 PWGWRLSLGLAAFPALLMTLGGYFLPETPNSLVERGLTERGRRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNI---LQKRHRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGN-ASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRS--AGQSITV 429          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 59/229 (25.76%), Postives = 100/229 (43.67%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNA---VGTIVGIYLIDHFGRKKLALSSLAGVIISLVL--LSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR 684
            P  WR  LG++ VPAI+ F+  L +PE+P  L  +   EKA  VL K+     +E E   L  A++     K   R L   +++                    +N++++Y+P + Q  GF  +            TNA   V  I+ +Y  D FGR+ L L +   +   +V+  ++ A             G I V+ + L++  +    GP+ W + SE++P + R
Sbjct:  200 PWGWRLSLGLATVPAILMFLGGLVLPETPNSLVEQGKLEKAKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRP--QLVIGAIGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTI----TNAALVVAAIMSMYSADKFGRRFLLLEASVEMFCYMVVVGVTLALKFGEGKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPLETR 422          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 57/226 (25.22%), Postives = 99/226 (43.81%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKI--YDIAR--LEDEIDHLSAAAEEELRKKKTVRYLDV-FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR 684
            +R  +G+    A +  + +  +PE+PR+L  + DK  A L LS++   DI    L +E+  + A  + E+       Y D+ F    +                  +N +MYY  T    AG  +              N   TI G+++++ +GR++L +    G+ I  +L++ AF              + +  +A+YI FFA   GPV W + SE+YP + R
Sbjct:  192 YRVPIGLQLTWACVLALGLTVLPETPRYLIKRGDKNAAALSLSRLRRLDITHPALVEELAEIEANHQYEMALGPD-SYKDILFGEPHLGRRTFTGCCLQMLQQLTGVNFIMYYGTTFFNNAGVGN---PFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA-AFATASGSNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVR 412          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 57/249 (22.89%), Postives = 101/249 (40.56%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----------------IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WRW+  +  VP  +  +LM +MPE+PR+L  +   ++A+  L  ++     E+  +     AE +  +   +R   ++K   I                  +N +M+Y+ +I + A F+ +               + T V   ++D  GR+ L   S   ++ S+      F                 I            W+AV  + L+IA FA G GP+PW L SE++P   +G+  G+    N
Sbjct:  181 WRWLAVLGCVPPTLMLLLMCYMPETPRFLLTQHQYQEAMAALRFLWGS---EEGWEEPPVGAEHQGFQLALLRRPGIYKPLII------GISLMVFQQLSGVNAIMFYANSIFEEAKFKDSSLASVTVGII---QVLFTAVAALIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTN 417          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 53/233 (22.75%), Postives = 104/233 (44.64%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            W  +LG++A+PA +  +L+ F PESPR+L + K D   A   L ++     ++ E++ +    E E +    +  L +F+ + +R                 +N + YY+  I   AG + +Q            N + TI  ++++++ GR+ L L   +   I+  +L+ A              +I+++ +  Y+   A G  P+P  L +EV+ +  R     +  TV+
Sbjct:  192 WPILLGLTAIPAALQLLLLPFFPESPRYLLIQKKDAAAAKNALKRLRGWDDVDAEMEEIQLEDEAE-KAAGIISVLTMFRMRSLRWQVISIIILMGGQQLSGVNAIYYYADQIYLSAGVK-DQDVQYVTVGTGAVNVLMTICAVFVVEYLGRRALLLLGFSVCFIACCVLTVALALQDRVSWMP---YISIVCVISYVIGHALGPSPIPALLITEVFLQSSRSAAYMVGGTVH 419          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 55/237 (23.21%), Postives = 107/237 (45.15%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKS-DKEKAILVLSKIYDIARLEDEI-DHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGF-QSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV--YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  L  +A+PA I  +  LF+PE+P  +   + D  K  L+L ++     ++DE+ D + A++  +      ++ L     ++ R                 IN V +Y+P + +  GF +S            GT++  T++ + ++D  GRK L L     +++S V +    +            YG+  V+ + +Y+A F    GP+ W + SE++P + R +   ++  V+
Sbjct:  205 WRISLATAAIPASILTLGSLFLPETPNSIIQTTGDVHKTELMLRRVRGTNDVQDELTDLVEASSGSDTDSNAFLKLLQ----RKYRPELVMALVIPFFQQVTGINVVAFYAPVLYRTVGFGESGSLMSTLVTGIVGTSS--TLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVIVMVADVHDGVIKEGYGYAVVVLVCVYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVS 435          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12
Identity = 57/245 (23.27%), Postives = 106/245 (43.27%), Query Frame = 1
Query:    1 ARGVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLF-MKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFK--SKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAV---GTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            A G    WR +  +  +P+++   L+ F+PESPRWL  +  + E   ++LS   + + + DE   +    E  +++++ +     FK   ++                   +N   +Y+ +I    G  S+            T+ V   G I+G  L+D  GR+ L L S AG+ +  +  + +F              +A+  + +Y   +  GMG +PW + SE+YP   +G  G M + V+
Sbjct:  175 ALGTIVAWRNLAILGCIPSLMVLPLLFFIPESPRWLAKVGREMEVEAVLLSLRGEKSDVSDEAAEILEYTEH-VKQQQDIDDRGFFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFYTDSIFISTGVSSD-------FGFISTSVVQMFGGILGTVLVDVSGRRTLLLVSQAGMFLGCLTTAISFFLKENHCWETGTPVLALFSVMVYFGSYGSGMGSIPWIIASEIYPVDVKGAAGTMCNLVS 411          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 58/234 (24.79%), Postives = 96/234 (41.03%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTV 714
            WR  LG++ +PA++  V  L + E+P  L  +   ++   VL +I     +E E   L  A+      K   R L     +  R                 IN +M+Y+P +    GF S+             N + T+V IY +D  GR+ L L +   +  S V+++      +          +  + V+ +  Y+A FA   GP+ W + SE +P + R    G S TV
Sbjct:  202 WRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVEPEFADLLEASRLAKEVKHPFRNL---LQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSD-ASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRS--AGQSVTV 429          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
STP10_ARATH1.223e-1225.21Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
XYLL1_ARATH1.597e-1224.89D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
STP7_ARATH1.597e-1225.42Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STP14_ARATH1.597e-1225.76Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
RCO3_NEUCR2.724e-1225.22Probable glucose transporter rco-3 OS=Neurospora c... [more]
GTR8_MOUSE2.724e-1222.89Solute carrier family 2, facilitated glucose trans... [more]
GTR5_HORSE2.724e-1222.75Solute carrier family 2, facilitated glucose trans... [more]
STP3_ARATH6.068e-1223.21Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
EDL15_ARATH7.924e-1223.27Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
STP13_ARATH1.035e-1124.79Sugar transport protein 13 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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